Tc09v2_t013690.2

Overview
NameTc09v2_t013690.2
Unique NameTc09v2_t013690.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1707
Properties
Property NameValue
NoteMannosyltransferase
Model evidenceSupporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
ProductGPI mannosyltransferase 3, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589096
GenbankXM_007013918.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g013690Tc09v2_g013690Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p013690.2Tc09v2_p013690.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto450719auto450719Theobroma cacaoexon
exon-auto450720auto450720Theobroma cacaoexon
exon-auto450721auto450721Theobroma cacaoexon
exon-auto450722auto450722Theobroma cacaoexon
exon-auto450723auto450723Theobroma cacaoexon
exon-auto450724auto450724Theobroma cacaoexon
exon-auto450725auto450725Theobroma cacaoexon
exon-auto450726auto450726Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto450727auto450727Theobroma cacaoCDS
CDS-auto450728auto450728Theobroma cacaoCDS
CDS-auto450729auto450729Theobroma cacaoCDS
CDS-auto450730auto450730Theobroma cacaoCDS
CDS-auto450731auto450731Theobroma cacaoCDS
CDS-auto450732auto450732Theobroma cacaoCDS
CDS-auto450733auto450733Theobroma cacaoCDS
CDS-auto450734auto450734Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t013690.2 ID=Tc09v2_t013690.2|Name=Tc09v2_t013690.2|organism=Theobroma cacao|type=mRNA|length=1707bp
ATGAAACGAAGAAAGAATGATTCTTCAAATAAGCACCCGAATCTGTCTAG
CGAAGAAGAAAAACAAGAAAAGAAATCTCCAGATTCTTCAAAGAAAGTAT
TGGCGATTTGTTTGGGATTTCGAATGCTCAACGCGCTCTTGATTCAAACT
TATTTCAATCCAGATGAACACTGGCAAGCCCTCGAAGTTGCTCATCGCAT
CGCCTTTGGGTATGGTCATTTGACATGGGAGTGGAAGAAGGGAATTCGAA
GCTACTTGCATCCAATGTTGTTCGCTCTCTTTTACAAAGTTATCGCGTTT
TTGGGTCTTGATACACCGTGGTTCATGATGAAGGCCCCACGGCTGCTGCA
ATCCATATTTTCTGCAGTTGGTGATTTATACTTGTATAAACTTTCTCGTG
TTCTGTTTGGTGATGGTGTTGCAAAATGGGCTGTATCCTTGTCATATGTT
ATAAGGTTTTATGCTTTGCACTTGTTTGCAGTCAAGCTGTTTTCTGGTTG
GCCTTTTATGATGGATGATGTACTTAACCATTTTCAGTTATTTTCTCAAT
TGGCAAACTGGTTCAATTTTTTCTGTTTCAATCGTACATTATCAAATAGT
TTGGAGACTGTTCTTACCCTTGTTGGCCTTTACTACTGGCCATGTATGAG
AAGTTCTTCGAACAAAGTCCCTTCAGATTCAAGAAAGTGGGGTTTGGCTG
TAGCTGCATTAGCTTGTGCCATTAGACCAACAAGTGCTATTACATGGGTG
TATGTTGGCCTACTTGAGTTGTACTTGACTCGTGCGCGGCTGAGATTTAT
TTTTATGGAGTTGATTCCTATTGGGACTCTGGTGCTTGGATTTATGTGTT
TGGTAGATTGTCTATTGTATGGCTCCTGGGTCTTAGCACCACTTAATTTT
CTCAAGTTCAATTTTCTTTCCTCTGGTGGAGATTATTATGGAAATCACAA
GTGGCACTGGTACTTCACTCAGGGATTTACAGTGATGCTTTTCAGTTTTC
TTCCATTTTGTCTTGCTGGCATTATCAAGTCTAAAAATTGGAAACTTTCT
GGCCTTATTGTGTGGGTTTTAGGACTATACAGCATACTTGGTCACAAAGA
ATTCAGGTTTGTCCTCCCTGTGCTTCCCATAAGTTTGATATTATCTGGAT
ACTCATTAGCTGCACTTGAAGAACATGGTGCTCCAAATAGTGAAAGGAAA
GGACCTTCACACATTCACAAGAAATGGCCTTCAAAAAGGCAACTTGCTAT
CTGCTTCTTGCTTGCAACCAATATTCCAATGGCCCTCTATATGAGTTTAG
TTCATCAGAGAGGAACTGAGGATGTGATGAACTATCTATCTAAAGAAGCT
GCGAGAGAGAAAGTGAAAAGTATCCTTTTCCTAATGCCCTGCCATGCCAC
ACCCTACTATTCAACTCTGCATCGCAACCTTCCCATGCGTTTTTTGGATT
GCTCACCAAGTGAAGAGAAAGGAATCCCTGATGAATCGGATCGTTTCATG
ATGAATCCTGTTGGTTTTGCAATGGATTTTGCAAAAACTTGGTCTTGCCC
TAGTCATATTGTATTGTTCGATTCAGAGGAGAAGCAATTAAGAAATTTTC
TAGTTTCGCATTCTTTTAGAGAGGTTAGAAGGTTTTTCCATGCTCACTTC
AAGGTAGACCGAGATCTTCAAGCATCAGTCGTTGTATACGCTACAAGTGG
CATGTGA
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protein sequence of Tc09v2_p013690.2

>Tc09v2_p013690.2 ID=Tc09v2_p013690.2|Name=Tc09v2_p013690.2|organism=Theobroma cacao|type=polypeptide|length=569bp
MKRRKNDSSNKHPNLSSEEEKQEKKSPDSSKKVLAICLGFRMLNALLIQT
YFNPDEHWQALEVAHRIAFGYGHLTWEWKKGIRSYLHPMLFALFYKVIAF
LGLDTPWFMMKAPRLLQSIFSAVGDLYLYKLSRVLFGDGVAKWAVSLSYV
IRFYALHLFAVKLFSGWPFMMDDVLNHFQLFSQLANWFNFFCFNRTLSNS
LETVLTLVGLYYWPCMRSSSNKVPSDSRKWGLAVAALACAIRPTSAITWV
YVGLLELYLTRARLRFIFMELIPIGTLVLGFMCLVDCLLYGSWVLAPLNF
LKFNFLSSGGDYYGNHKWHWYFTQGFTVMLFSFLPFCLAGIIKSKNWKLS
GLIVWVLGLYSILGHKEFRFVLPVLPISLILSGYSLAALEEHGAPNSERK
GPSHIHKKWPSKRQLAICFLLATNIPMALYMSLVHQRGTEDVMNYLSKEA
AREKVKSILFLMPCHATPYYSTLHRNLPMRFLDCSPSEEKGIPDESDRFM
MNPVGFAMDFAKTWSCPSHIVLFDSEEKQLRNFLVSHSFREVRRFFHAHF
KVDRDLQASVVVYATSGM*
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