Tc09v2_t011680.1

Overview
NameTc09v2_t011680.1
Unique NameTc09v2_t011680.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2046
Properties
Property NameValue
NoteArogenate dehydrogenase 1, chloroplastic
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Productarogenate dehydrogenase 1, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588854
GenbankXM_018126419.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g011680Tc09v2_g011680Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p011680.1Tc09v2_p011680.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto446362auto446362Theobroma cacaoexon
exon-auto446363auto446363Theobroma cacaoexon
exon-auto446364auto446364Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto446365auto446365Theobroma cacaoCDS
CDS-auto446366auto446366Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t011680.1 ID=Tc09v2_t011680.1|Name=Tc09v2_t011680.1|organism=Theobroma cacao|type=mRNA|length=2046bp
ATGATTTCTCTTCCTTCTCTCCATCAATCTCTTTCAAAACCCTCTGTTTT
CCTTCTTTCTTCTCCCTCCCCACTTTTCCTCCAATCTCTCTTTTTGCTCC
CAACATCAACAAAACCCATTTCCATCCATTCCTCCAAACCACTTCCCATC
AAGTGTTGTTACTCCTCCACCACCACCTCCGCTGAACCCGCCCAAGAACA
TGTCCGACCCGTTTCTACCCTCAAGATAGCTATTATAGGCTTTGGCAACT
ACGGCCAATTCCTAGCTAAAACTCTCGTCTCTCAAGGCCACAAAGTTTTA
GCCTACTCGAGATCCGACTATTCCCATGTCGCTAAAAGTTTGGGAGTTTC
CTTCTTTATAAACCCCCACGACTTATGTGAACAACACCCACACGTTATCC
TCCTTTGTACTTCAATTATCTCGACCGAACAAGTGTTGAGATCTCTTCCT
TTACAAAGACTGAAACGGTCCACATTATTTGTCGACGTTTTATCCGTCAA
AGAGTTCGCCAAGAATCTCCTCCTTGATTTCTTGCCCTCTGATTTCGACA
TCATTTGTTCCCATCCCATGTTCGGACCACAAAGCGCCAAACAAAGCTGG
AAAGACCTCTTCTTTGTCTACGAAAAGGTTAGAATCGGAAACGAATCTTC
CAGGGTTCAAAGATGTGAAGATTTTCTGGGAATATTTGAAAGTGAAGGTT
GTAAAATGGTGGAAATGAGCTGTCAAGAGCACGACAAGTTTGCAGCGGGG
TCACAGTTTATGACACACACGGTTGGGAGGGTGTTGGACATGTTGGGTTT
GGAGTCAACGCCAATTAATACAAAGGGTTATGAGGCTTTGTTAGAATTGG
TTGAGAATACTTGTAGGGATAGCTTTGATTTGTATTATGGCTTGTTTCTG
TATAATAAGAGTGCTTTGGAGATGGTTGAGAGGTTGGATTTGGCTTTTGA
TGCTTTGAGGAATGAGCTTTTTGGGAGGTTGCATCATGTTGTGAGGAAAC
AGTTGTTCGAGAACGGAGAGAAGGGAAAGAGTCTGGAAGGAATTAGATAC
GAAAATGGTGCTGCTTTGGCTTCAAGCTCAAATCCTTTGAGATCTCAAGA
TGCTATTCTACCATATGAATTTAAAGGAAAGATATCTGAAAGTGTTGATG
ATAGTTCAAAACTCAAGATTGCAATTGTTGGATTTGGAAACTTCGGTCAG
TTCCTTGCCAAAACCCTGGCTTGTCAGGGCCACTCAGTTTTAGCTTATTC
AAGAACTGATTATAGAGATGCAGCTCAGAAATTGGGGGTTTCTTTCTTCT
CTGACGCTAATGACCTTTGTGAAGAACATCCCGAAGTTATTCTTCTGTGT
ACCTCGATTCTTTCGACTGAAAAAGTTCTCAAGTCATTGCCACTTCAGAG
ATTGAAGAGAAGTACTCTGTTTGTTGATGTGCTGTCTGTGAAAGAGTTCC
CAAGGAATTTGTTTCTTCAACATTTACCATCGGATTTTGATATTCTATGC
ACGCATCCCATGTTTGGACCAGAAAGTGGTAAAAATGGTTGGAATTCTCT
TCCTTTTCTTTTTGATAAGGTGAGGGTTGGAAGTGATGAAAGAAGAGTAG
CTCGGTGTAATAAGTTCCTTGATATTTTTGCACGAGAAGGATGCCGAATG
GTGGAGATGAGTTGTGCAGAACACGATCGGCATGCGGCAGGGTCACAGTT
CATTACCCACACCATGGGCAGGGTTTTGGAGAAGTTAGAATTGGATTCTA
CGCCAATTAACACAAAAGGGTATGATACTTTGTTGAAGTTGGTGGAGAAT
ACAGCTGGAGACAGCTTTGAACTTTATTATGGGCTGTTCATGTACAATGT
GAATGCAATGGAACAGCTAGAGAGAATGGATTTTGCCTTTGAGTCATTGA
AGAAGCAGCTCTTTGGTAGATTGCATGGTGTCCTTCGGAAGCAACTGTTT
GGAAATTCAGAGAACTTTGAAGTTTTGAGGGAGAAATCTGTTGAGGGAAA
TGGTGCTGCACTTTCATCTTCTCCAGAGAGTGTTAAAATCAGTTAG
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protein sequence of Tc09v2_p011680.1

>Tc09v2_p011680.1 ID=Tc09v2_p011680.1|Name=Tc09v2_p011680.1|organism=Theobroma cacao|type=polypeptide|length=682bp
MISLPSLHQSLSKPSVFLLSSPSPLFLQSLFLLPTSTKPISIHSSKPLPI
KCCYSSTTTSAEPAQEHVRPVSTLKIAIIGFGNYGQFLAKTLVSQGHKVL
AYSRSDYSHVAKSLGVSFFINPHDLCEQHPHVILLCTSIISTEQVLRSLP
LQRLKRSTLFVDVLSVKEFAKNLLLDFLPSDFDIICSHPMFGPQSAKQSW
KDLFFVYEKVRIGNESSRVQRCEDFLGIFESEGCKMVEMSCQEHDKFAAG
SQFMTHTVGRVLDMLGLESTPINTKGYEALLELVENTCRDSFDLYYGLFL
YNKSALEMVERLDLAFDALRNELFGRLHHVVRKQLFENGEKGKSLEGIRY
ENGAALASSSNPLRSQDAILPYEFKGKISESVDDSSKLKIAIVGFGNFGQ
FLAKTLACQGHSVLAYSRTDYRDAAQKLGVSFFSDANDLCEEHPEVILLC
TSILSTEKVLKSLPLQRLKRSTLFVDVLSVKEFPRNLFLQHLPSDFDILC
THPMFGPESGKNGWNSLPFLFDKVRVGSDERRVARCNKFLDIFAREGCRM
VEMSCAEHDRHAAGSQFITHTMGRVLEKLELDSTPINTKGYDTLLKLVEN
TAGDSFELYYGLFMYNVNAMEQLERMDFAFESLKKQLFGRLHGVLRKQLF
GNSENFEVLREKSVEGNGAALSSSPESVKIS*
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