Tc09v2_t011610.1

Overview
NameTc09v2_t011610.1
Unique NameTc09v2_t011610.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1419
Properties
Property NameValue
NoteMonogalactosyldiacylglycerol synthase 2, chloroplastic
Model evidenceSupporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productmonogalactosyldiacylglycerol synthase 2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588847
GenbankXM_018126533.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g011610Tc09v2_g011610Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p011610.1Tc09v2_p011610.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto446267auto446267Theobroma cacaoexon
exon-auto446268auto446268Theobroma cacaoexon
exon-auto446269auto446269Theobroma cacaoexon
exon-auto446270auto446270Theobroma cacaoexon
exon-auto446271auto446271Theobroma cacaoexon
exon-auto446272auto446272Theobroma cacaoexon
exon-auto446273auto446273Theobroma cacaoexon
exon-auto446274auto446274Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto446275auto446275Theobroma cacaoCDS
CDS-auto446276auto446276Theobroma cacaoCDS
CDS-auto446277auto446277Theobroma cacaoCDS
CDS-auto446278auto446278Theobroma cacaoCDS
CDS-auto446279auto446279Theobroma cacaoCDS
CDS-auto446280auto446280Theobroma cacaoCDS
CDS-auto446281auto446281Theobroma cacaoCDS
CDS-auto446282auto446282Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t011610.1 ID=Tc09v2_t011610.1|Name=Tc09v2_t011610.1|organism=Theobroma cacao|type=mRNA|length=1419bp
ATGGTGATGAAAGTATCGTCGCCAAAGAAGGTTGCTTCCATTACAGAGAA
GGTATGGCAGAGAGTTTATGGGAATTATAGCAGTAGCAGCAACAGCAGCC
ATTATCATCATCATCAGCATCATCGTCATCAAAGGAGGTGTTCTTATGAG
AGTGAGGATGAATACGAGGATGATTATGGGACCATACAGTTGATGCAGAT
GGGTGCTGAAAGAACCAAGAATGTGCTGATTCTCATGAGTGATACGGGTG
GTGGCCATAGAGCTTCAGCTGAGGCCATCCGTGATGCCTTCCGGATTGAG
TTTGGAGATGAATACAGGATAATTGTGAAAGATGTTTGGAAAGAGTATAC
AGGCTGGCCATTGAACGACATGGAGAGGTCCTACAAGTTCATGGTGAAAC
ATGTACAACTCTGGAAAGTCGCCTTTCACAGCACGTCTCCTAAATGGATA
CATAGCTGCTATCTTGCTGCCATTGCTGCTTATTATGCCAAAGAGGTGGA
GGCTGGCCTCATGGAGTACAAGCCGGACATTATCATTAGTGTGCATCCGT
TAATGCAACACATTCCTCTCTGGGTTCTTAAATGGCAAGGCCTTCAAAAG
AAAGTAGTTTTTGTCACTGTAATTACAGACCTCAATACCTGCCACCCGAC
GTGGTTTCACCCTGGGGTTAATAGATGCTACTGCCCGTCAAAGGAGGTTG
CCAAGCGGGCATTATGTGATGGACTTGAGGAGTCCCAAATTCAGGTTTTT
GGTCTGCCTATTCGGCCTTCATTTGCCCGTGCAGTTCTTTCTAAGGATGA
CTTAAGGATAGAGCTTGAGATGGATCCCGATTTGCCTGCAGTTCTGCTAA
TGGGAGGGGGTGAAGGGATGGGCCCTGTTAAGAAAACGGCCATTGCTCTT
GGAGAATCACTATATGATAAAGATCAAGAGAAACCAATAGGGCAATTAAT
CATAATATGTGGCCGAAACAAATCCCTTGTCTCTACATTGGAATCAGAGG
AATGGACGATCCCAGTAAAGGTCAGAGGGTTTGAGACTCAGATGGAGAAA
TGGATGGGAGCTTGTGACTGCATAATTACAAAAGCTGGTCCAGGTACCAT
TGCAGAGGCCTTGATAAGGGGGCTTCCAATTGTTCTCAATGACTACATTC
CAGGACAGGAAAAGGGTAATGTACCTTATGTAGTAGACAATGGAGCAGGA
GTATTCACCAGAAGTCCAAAGGAAACAGCTAGAATTGTGGCTGAATGGTT
CAGCACAAAGACAGATGAGCTCAAGAGAATGTCAGAAAATGCTCTTAAAC
TAGCACAACCCGAGGCCGTATTCGATATTGTAAAGGATATCCACGAGCTT
GCCTGCCAAAGAGGGCCCCTAGCCAATGTTCCTTATGTGTTGACATCATC
ATTCACAAGCCTAATATAA
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protein sequence of Tc09v2_p011610.1

>Tc09v2_p011610.1 ID=Tc09v2_p011610.1|Name=Tc09v2_p011610.1|organism=Theobroma cacao|type=polypeptide|length=473bp
MVMKVSSPKKVASITEKVWQRVYGNYSSSSNSSHYHHHQHHRHQRRCSYE
SEDEYEDDYGTIQLMQMGAERTKNVLILMSDTGGGHRASAEAIRDAFRIE
FGDEYRIIVKDVWKEYTGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWI
HSCYLAAIAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQK
KVVFVTVITDLNTCHPTWFHPGVNRCYCPSKEVAKRALCDGLEESQIQVF
GLPIRPSFARAVLSKDDLRIELEMDPDLPAVLLMGGGEGMGPVKKTAIAL
GESLYDKDQEKPIGQLIIICGRNKSLVSTLESEEWTIPVKVRGFETQMEK
WMGACDCIITKAGPGTIAEALIRGLPIVLNDYIPGQEKGNVPYVVDNGAG
VFTRSPKETARIVAEWFSTKTDELKRMSENALKLAQPEAVFDIVKDIHEL
ACQRGPLANVPYVLTSSFTSLI*
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