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Properties
Property Name | Value |
Note | Tetratricopeptide repeat-like superfamily protein |
Model evidence | Supporting evidence includes similarity to: 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns |
Product | CCR4-NOT transcription complex subunit 10, transcript variant X1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t011360.1 ID=Tc09v2_t011360.1|Name=Tc09v2_t011360.1|organism=Theobroma cacao|type=mRNA|length=2556bp ATGGATTCGAGGGATTCATCATCGTCGTCGGCTCCGAATCGAGATGGTGC CGCCGGCGACGACGACGGCGTTCTGTCCGTCACTGCTGCTCTTGCTAAAG ACGCCGCCCTTTACTTCCAGTCTAGAAAGTTTGCCGAGTGCGTCGATGTC TTGAATCAGCTCAAGCCGAAGAAAGAAGACGATCCGAAGGTTCTTCATAA TATTGCAATTGCGGAGTTTTTTCGGGATGGTTGCTCAGATCCCAAGAAAT TGCTTGAAGTCCTTAACAATGTCAAGAAGAGAAGCGAGGAGCTTGCTCAT GCTTCTGGAGAACAGGTGGAGTCTGGTAACAATGTTGGAAATAAAGGTAG TTCAGGTTCAAAAGGAAGTGGTACAATAACACAACAGTTTTCTGGTTCAA ATAGTGCCAGTATTATTTACACAGATGAGTTTGATACCTCTGTGGCTGCT TTAAACATAGCGGTCATTTGGTTCCATCTTCATGAATATGCAAAGGCATT ATCAGTTCTTGAACCTCTGTATCAAAGCATTGAACCCATAGATGAGACAA CAGCTCTTCATATCTGCCTTTTGTTGCTGGATGTTGTGCTAGCCTGCCAT GATGCTTCAAAATCTGCTGATGTATTGAATTATTTGGAAAAGGCATTTGG CGTTGGCAATGTCAGTCAGGGGGACAATGGTAACATGGTTGCCCAACAAT CCACGAGTCTAGTAGGAAAATCATCCTCTGTACCAAGCAGCTCATTGGTC TCAGATACTTCTAGTTCAGACTTAGCTGCTAGTGTAAATGCCTCTGAGAA TCCTCTATCAAGAACTTTATCAGAGGACCCACTGGATGAAATGTTTTCGA CACTGGATATTGGTGGACAAAACTTAGCAAGGTCTGCTGGTCTTACATCT GCAGATGATCTTCCCAGGACCACAGTTGATAGATCTATCTCTGGTGTTGA TCTGAAGCTCAAGTTGCAACTTTACAAGGTTCAGTTTTTGCTTCTCACTA GAAATGTAAAGATAGCAAAGCGTGAAGTCAAGCTTGCTATGAACATTGCT CGAGGGAGAGATTCATCTATGGCTCTCCTCTTGAAGGCCCAGCTTGAGTA TGCTCGTGGAAACCATCGAAAAGCCATCAAGTTGTTGATGGCATCAAGTA ATCGGGCAGATGCAGCAATTTCAAGCATGTTTAACAACAATCTAGGCTGC ATATACTATCAACTTGGGAAGTATCATACATCTGCAGTGTTCTTTTCCAA GGCACTGAGTAGTTGTTCATCTCTGCAGAAGGAGAAGCCTCTAAAGCTAT TAACATTCTCGCAGGATAAATCTCTTGTCATAACATATAACTGTGGGTTG CAGTACTTGGCCTGTGGGAAACCAATACTGGCTGCTCGTTGTTTCCAGAA AGCAAGTTTAATTTTCTACAAAAGACCCCTCTTGTGGCTTCGGCTTGCCG AATGTTGTCTAATGGCTGCAGAGAAAGGACTTGTAAAAGGAAGTTGTGCT TCATCAGACAGATCAGAAATTAGAGTCAATGTTATTGGAAAGGGTAGGTG GAGGCAACTTCTAATTGAAGACGGAATTTCAAGGAATGGACTCGTAGATT CTTCTGAAAAGGATGACTGGGCTTTAGGTATTGATGGGCAGCCTAAGCTT TCATTGTCACTTGCTAGGCAGTGTCTCTATGATGCACTGCACTTGTTGAA CTGTTCTGAGTGGAGTAATTCAAAGTCTGCTTTACCCTCCAATGCCTCCT TAGAGGAAAATGAAGATGGAGCATCTTCCAAGAACTCAAACCATAAGAAC TTATCTGGAATTGATTCCAAGGCTTCAACTATGTCAGTAGGTCTAGTTAA CTCAAATGGGGATGTGAAAGAGCCAAAGGGGGGAACTAATCAGGAGATTA TTCAGAACTCCATCTCCTATTATGAAGGTATTTGCAGAAGAGAAAATCAG ATGATTAAGCAGGCTCTTCTTGCTAATTTGGCATATGTAGAGTTAGAACT GGAAAATCCTTTGAAGGCCCTTTCTGCAGCACGATCTCTGTTAGAACTAC CAGGTTGTTCAAGAATTTACATCTTTCTAGGTCATGTCTATGTGGCAGAG GCTCTCTGCTTGCTGAACAAGCCTAAGGAAGCTGCAGAGCATTTATCCTT TTATTTGTCTGAGGGAAATAATGTTGAATTGCCGTTTGGTCAAGAGGACT GTGAACAGTGGCGAGTGGAAAAACCTGTTGATTGTGAAGAATCAACTGGA GCAGCATCAGCCAAGAATCCTTCCCCTGAGGGCTTGGTGGATTTCATGTT TCTTAATCCAGAGGAGGCACGTGGAACCCTTTATGCAAATCTTGCTGCTG TGTCTGCAATACAAGGTGAACTCGAGCGGGCCCACCATTTTCTGAGGCAA GCATTGTCCCTGGTACCCAACAGTAGCGAAGCCACTATGACTGCAATATA TGTTGATCTCATGCTTGGTAAGTCGCAAGACGCTCTGTCCAAGTTAAAAC GTTGTAGTCATGTCAGGTTCCTTCCCAGCAGCCTACAGCTGAATAAATCC TCGTAA back to topprotein sequence of Tc09v2_p011360.1 >Tc09v2_p011360.1 ID=Tc09v2_p011360.1|Name=Tc09v2_p011360.1|organism=Theobroma cacao|type=polypeptide|length=852bp
MDSRDSSSSSAPNRDGAAGDDDGVLSVTAALAKDAALYFQSRKFAECVDV LNQLKPKKEDDPKVLHNIAIAEFFRDGCSDPKKLLEVLNNVKKRSEELAH ASGEQVESGNNVGNKGSSGSKGSGTITQQFSGSNSASIIYTDEFDTSVAA LNIAVIWFHLHEYAKALSVLEPLYQSIEPIDETTALHICLLLLDVVLACH DASKSADVLNYLEKAFGVGNVSQGDNGNMVAQQSTSLVGKSSSVPSSSLV SDTSSSDLAASVNASENPLSRTLSEDPLDEMFSTLDIGGQNLARSAGLTS ADDLPRTTVDRSISGVDLKLKLQLYKVQFLLLTRNVKIAKREVKLAMNIA RGRDSSMALLLKAQLEYARGNHRKAIKLLMASSNRADAAISSMFNNNLGC IYYQLGKYHTSAVFFSKALSSCSSLQKEKPLKLLTFSQDKSLVITYNCGL QYLACGKPILAARCFQKASLIFYKRPLLWLRLAECCLMAAEKGLVKGSCA SSDRSEIRVNVIGKGRWRQLLIEDGISRNGLVDSSEKDDWALGIDGQPKL SLSLARQCLYDALHLLNCSEWSNSKSALPSNASLEENEDGASSKNSNHKN LSGIDSKASTMSVGLVNSNGDVKEPKGGTNQEIIQNSISYYEGICRRENQ MIKQALLANLAYVELELENPLKALSAARSLLELPGCSRIYIFLGHVYVAE ALCLLNKPKEAAEHLSFYLSEGNNVELPFGQEDCEQWRVEKPVDCEESTG AASAKNPSPEGLVDFMFLNPEEARGTLYANLAAVSAIQGELERAHHFLRQ ALSLVPNSSEATMTAIYVDLMLGKSQDALSKLKRCSHVRFLPSSLQLNKS S* back to top
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