Tc09v2_t010320.1

Overview
NameTc09v2_t010320.1
Unique NameTc09v2_t010320.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1569
Properties
Property NameValue
NoteCytochrome P450 734A1
Model evidenceSupporting evidence includes similarity to: 1 EST, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productcytochrome P450 734A1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588701
GenbankXM_007013277.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g010320Tc09v2_g010320Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p010320.1Tc09v2_p010320.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto443559auto443559Theobroma cacaoexon
exon-auto443560auto443560Theobroma cacaoexon
exon-auto443561auto443561Theobroma cacaoexon
exon-auto443562auto443562Theobroma cacaoexon
exon-auto443563auto443563Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto443564auto443564Theobroma cacaoCDS
CDS-auto443565auto443565Theobroma cacaoCDS
CDS-auto443566auto443566Theobroma cacaoCDS
CDS-auto443567auto443567Theobroma cacaoCDS
CDS-auto443568auto443568Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t010320.1 ID=Tc09v2_t010320.1|Name=Tc09v2_t010320.1|organism=Theobroma cacao|type=mRNA|length=1569bp
ATGGAGGAGGTCTTGTACTGGTTGAAGATGCTGGTCGTCTCTTTCATGGT
GTTAGTTGTCGTGTTAAAAGTTGCCGTGTTGCTTTGGTGGAGACCTAGGA
AGATTGAGGACCATTTCTCAAGGCAAGGGATCAGAGGACCCCCTTACCAT
TTCTTCATTGGAAATGTTAAGGAGCTTGTGGGCATGATGTTAAAGGCTTC
TTCTCAACCCATGCCTTTCTCTCACAATATTCTCCCCAGAGTCCTCTCTT
TCTACCATCATTGGAAGAAAATCTATGGTGCAACATTTCTTGTTTGGTTT
GGACCCACGGTTCGACTCACCGTCTCTGACCCCGATCTCATTAGGGAAAT
CTTCACTTCCAAGTCTGAATTCTATGAAAAGAACGAAGCCCACCCTCTGG
TTAAACAGCTTGAAGGGGATGGCCTCCTTAGTCTCAAAGGTGAAAAATGG
GCTCATCATAGAAAAATCATAACTCCCACTTTCCATATGGAAAATCTCAA
ATTGCTAGTGCCGGTGGTGGCAAAAAGAGTGACGGATATGCTGGACAAAT
GGTCGGCAATGTCACGCAGCTCCGGTGAGATTGAGATTGAAGTCTGCGAG
TGGTTTCAGACACTCACAGAAGATGTCATTACCCGTACCGCGTTCGGGAG
TAGCTATGAAGATGGAAAGGCCATATGTGGTCTACAAGCCCAACAAATGG
TACTTGCAGCCGAGGCATTTCAAAAAGTTTTCATCCCTGGGTATAGGTTT
TTGCCCACCAAGCGGAACATAAGTTGTTGGAAATTGGACCGGGAGATTAA
GAAGTCGTTGATGAAGCTGATCGATCGCCGGAAAAGGAATTCGGGGAACA
TACTGCAAGACAACGGTCCCAAGGATTTGCTAGGATTAATGATGCAAGCC
TCAATTTCGAGTCCAAGTATCACTGTCCATGACATAATTGAAGAGTGCAA
GAGCTTTTTCTTTGCGGGCAAACAGACCACATCCAACTTGCTGACGTGGA
CAACTGTTCTTCTAGCAATGCACCCACAGTGGCAGGTGCAAGCACGTGAG
GAGGTTCTAAAGGTGTGTGGATCACGTGACACACCCACTAAAGATGATGT
TGTAAAGCTTAAGACGATGAGTATGATCTTAAATGAATCCCTGCGGTTGT
ACCCACCAACAATAGCCACAATCAGACGGGCCAAAGCTGATGTTGAGCTT
GGGGGTTACATGATCCCTCGAGGGACCGAGCTTTTGATACCAATCTTGGC
CGTTCATCATGATCAAGCCATATGGGGCAATGATGCTAATGAGTTCAACC
CGGCTCGGTTCTCCGAGGGCGTGGCACGTGCAGCCAAACATCCTGTTGGG
TTCATCCCATTCGGCCTTGGGGTCCGTACGTGCATTGGGCAAAACCTAGC
CATTTTGCAAGCAAAATTAGCCCTTGCTCTCATACTTCAACGCTTCTCCT
TTAGGTTGGCCCCAACTTATCAACATGCGCCGACGGTTCTGATGCTACTT
TACCCACAACATGGAGCACCGATCATCTTCCAACCTCTGTCGGAACCGCT
ATCTGTCCCTCAGAGATGA
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protein sequence of Tc09v2_p010320.1

>Tc09v2_p010320.1 ID=Tc09v2_p010320.1|Name=Tc09v2_p010320.1|organism=Theobroma cacao|type=polypeptide|length=523bp
MEEVLYWLKMLVVSFMVLVVVLKVAVLLWWRPRKIEDHFSRQGIRGPPYH
FFIGNVKELVGMMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWF
GPTVRLTVSDPDLIREIFTSKSEFYEKNEAHPLVKQLEGDGLLSLKGEKW
AHHRKIITPTFHMENLKLLVPVVAKRVTDMLDKWSAMSRSSGEIEIEVCE
WFQTLTEDVITRTAFGSSYEDGKAICGLQAQQMVLAAEAFQKVFIPGYRF
LPTKRNISCWKLDREIKKSLMKLIDRRKRNSGNILQDNGPKDLLGLMMQA
SISSPSITVHDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQVQARE
EVLKVCGSRDTPTKDDVVKLKTMSMILNESLRLYPPTIATIRRAKADVEL
GGYMIPRGTELLIPILAVHHDQAIWGNDANEFNPARFSEGVARAAKHPVG
FIPFGLGVRTCIGQNLAILQAKLALALILQRFSFRLAPTYQHAPTVLMLL
YPQHGAPIIFQPLSEPLSVPQR*
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