Tc09v2_t008640.1

Overview
NameTc09v2_t008640.1
Unique NameTc09v2_t008640.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1497
Properties
Property NameValue
NoteHexokinase-1
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Producthexokinase-1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588505
GenbankXM_007012959.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g008640Tc09v2_g008640Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p008640.1Tc09v2_p008640.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto439304auto439304Theobroma cacaoexon
exon-auto439305auto439305Theobroma cacaoexon
exon-auto439306auto439306Theobroma cacaoexon
exon-auto439307auto439307Theobroma cacaoexon
exon-auto439308auto439308Theobroma cacaoexon
exon-auto439309auto439309Theobroma cacaoexon
exon-auto439310auto439310Theobroma cacaoexon
exon-auto439311auto439311Theobroma cacaoexon
exon-auto439312auto439312Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto439313auto439313Theobroma cacaoCDS
CDS-auto439314auto439314Theobroma cacaoCDS
CDS-auto439315auto439315Theobroma cacaoCDS
CDS-auto439316auto439316Theobroma cacaoCDS
CDS-auto439317auto439317Theobroma cacaoCDS
CDS-auto439318auto439318Theobroma cacaoCDS
CDS-auto439319auto439319Theobroma cacaoCDS
CDS-auto439320auto439320Theobroma cacaoCDS
CDS-auto439321auto439321Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t008640.1 ID=Tc09v2_t008640.1|Name=Tc09v2_t008640.1|organism=Theobroma cacao|type=mRNA|length=1497bp
ATGGGGAAGGTGGCGGTGGGAGCGGCTGTGGTTTGCGCTGCGGCGGTGTG
TGCTGCGGCGGCACTGGTGGTGCGTCACAGGATCAAGAGTTCGGGGAAGT
GGGCCCGTACGCTGGCTATCCTGAAAGAGTTCGAGGAAAAATGTGGGACC
CCAATTTCGAAGCTGAAGCAGGTGGCGGATGCTATGACCGTTGAGATGCA
CGCGGGGCTCGCATCAGAGGGTGGCAGCAAGCTCAAGATGATCATCAGCT
ACGTAGATAATCTCCCCACTGGTGACGAGAAAGGGTTGTTTTATGCCCTT
GACCTTGGTGGCACAAATTTTCGTGTCCTACGTGTACAGTTGGGTGGTAA
AGAAAGCCGTGTTGTTAAGCAGGAATTTGAGGAAGTTTCAATTCCTCCGC
ATTTGATGACCGGATCTTCTGATGCATTATTTGATTATATTGCTTCAGCT
CTTGCAAAATTTGTTGCTACAGAAAGTGAAGGTTTACATGTTTCACCTGG
TAGACAAAGGGAGCTGGGATTCACTTTCTCGTTTCCTGTTAGGCAAACAT
CAATATCATCAGGGACTCTTATAAAATGGACAAAGGGCTTCTCGATAGAT
GATACAGTTGGACAAGATGTTGTGGGTGAGTTGACCAAAGCCATGGAAAG
GGTTGGCCTTGACATGCGTGTGGCAGCTTTGGTTAATGATACAATTGGGA
CATTGGCTGGTGGTAGATACAACAACCCAGATGTTGTTGCTGCTGTGATA
TTGGGTACAGGCACAAATGCAGCTTATGTAGAGCGTGCCCACGCAATTCC
CAAATGGCATGGTCTTCTACCTAAATCAGGAGACATGGTTATCAACATGG
AGTGGGGTAACTTTCGGTCTTCACACCTTCCACTAACAGAATATGACCAA
GAACTTGATGCTGACAGTCTAAACCCTGGAGAACAGATTTTTGAAAAAAT
GATTTCTGGTATGTATTTGGGAGAGATTGTACGCAGAGTTTTGTACAAGA
TGGCTGAAGAAGCTGAATTTTTTGGTGATACTGTTCCACCAAAGTTGAAA
ATTCCTTTCATATTAAGAACTCCTCACATGTCTGCAATGCATCATGACAC
GTCTCCTGATCTGAAAGTGGTTGCAACCAAACTAAAGGATATATTAGAGA
TATCTAATACCTCCCTGAAAATGAGAAAAGTTATTGTTGAGCTGTGCGAC
ATTGTTGCTACTCGTGGTGCCCGTCTATCTGCTGCCGGAATCGTTGGCAT
CCTCAAGAAACTGGGAAGAGACATAGTGAAAGATGGTGAAAAGCTGAAGT
CAGTGGTAGCTCTAGATGGTGGATTATATGAGCACTACACTAAATTTAGG
ACCTGCATGGAGAACACCCTCACGGAGTTGTTAGGAGATGAAGTCTCTGA
CAATATTGTCATTGAGCACTCCAATGATGGCTCTGGCATTGGGGCAACCC
TCCTGGCAGCCTGTCACTCCCAATACATTGAGGTTGAGGAATCCTGA
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protein sequence of Tc09v2_p008640.1

>Tc09v2_p008640.1 ID=Tc09v2_p008640.1|Name=Tc09v2_p008640.1|organism=Theobroma cacao|type=polypeptide|length=499bp
MGKVAVGAAVVCAAAVCAAAALVVRHRIKSSGKWARTLAILKEFEEKCGT
PISKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGLFYAL
DLGGTNFRVLRVQLGGKESRVVKQEFEEVSIPPHLMTGSSDALFDYIASA
LAKFVATESEGLHVSPGRQRELGFTFSFPVRQTSISSGTLIKWTKGFSID
DTVGQDVVGELTKAMERVGLDMRVAALVNDTIGTLAGGRYNNPDVVAAVI
LGTGTNAAYVERAHAIPKWHGLLPKSGDMVINMEWGNFRSSHLPLTEYDQ
ELDADSLNPGEQIFEKMISGMYLGEIVRRVLYKMAEEAEFFGDTVPPKLK
IPFILRTPHMSAMHHDTSPDLKVVATKLKDILEISNTSLKMRKVIVELCD
IVATRGARLSAAGIVGILKKLGRDIVKDGEKLKSVVALDGGLYEHYTKFR
TCMENTLTELLGDEVSDNIVIEHSNDGSGIGATLLAACHSQYIEVEES*
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