Tc09v2_t007810.1

Overview
NameTc09v2_t007810.1
Unique NameTc09v2_t007810.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1479
Properties
Property NameValue
NoteAlkaline-phosphatase-like family protein isoform 1
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Productvenom phosphodiesterase 2, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588408
GenbankXM_018127636.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g007810Tc09v2_g007810Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p007810.1Tc09v2_p007810.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto437473auto437473Theobroma cacaoexon
exon-auto437474auto437474Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto437475auto437475Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t007810.1 ID=Tc09v2_t007810.1|Name=Tc09v2_t007810.1|organism=Theobroma cacao|type=mRNA|length=1479bp
ATGACGAGTTCTGATTCATTGAGTCAAACAAAGCCAATACCAATCCCCAC
CCAAGAAGAAGACCCTTCAAGCCAATCCACAGCTCTTCTTTCTTTCAACA
CTGATTCTTCTTTAGACCCTTCAGCTAAAGAATCTCCTTCAAAGCCCACC
ACCACCATCGTCTTCATTGCTTTAATACTCCTAACTTGCGTTGCTCTTTC
TGCTGCCTTTGCCTTTGCTTTCCTCTTTTACTCTTCTCCCTCTTCATCAT
CTTCCTCTTCAGCTACAGTTCACAACTTGTCTCGTCCTCTGAAGAAACTG
GAAAAACCAGTGGTTCTCTTGATTTCCTCTGATGGGTTTCGATTTGGGTA
CCAATTCAAGACTCCAACGCCAAACATCCACCGTTTGATTGCTAATGGAA
CAGAAGCTGAGATGGGTTTGATTCCTGTTTTCCCTACTCTTACTTTTCCT
AATCATTATTCCATCGTTACTGGCCTTTATCCTGCTTACCATGGTATTAT
AAATAATTATTTTGTGGATCCTAACACTGGTGAGGTTTTCACTATGGCGA
GTCACGAACCTAAATGGTGGTTAGGTGAACCACTTTGGGAGACCGTGGTC
AATCATGGGTTAGAGGCTGCTACTTATTTTTGGCCTGGAAGTGAGGTAAA
GAAAGGTTCTTGGAATTGCCCTGTAAAGTTCTGTATGGATTATAATGGTT
CTGTTCCATTTGAGGACAGAGTTGATACCGTTTTAAGTTATTTTGATCTG
CCTGGTAGTGAGATTCCTGCGTTTATGACATTGTATTTTGAGGATCCCGA
TCATCAGGGTCACCAAGTTGGACCTGATGATCCGGAGATTACTGAGGCTG
TTGCCAGAATTGACCGTATGATTGGGAGGTTGATTGATGGTTTAGAAAAA
AGAGGGGTTTTTGAGGATGTTACTATAATCATGGTTGGAGATCATGGGAT
GGTTGGTACATGTGATAAAAAGTTGATTTTTCTTGAGGATTTGGCCCCTT
GGACTGAAATTCCGAAGGAATGGGTTCAGTCTTATAGTCCATTGCTTGCT
ATTCGTCCACCTCCCGGTTATGCACCATCGGATATTGTTGCAAAGATGAA
AGATGGATTGGAGTCTGGGAAAGTTGAGAATGGAAAATTTTTGAAGGTTT
ATCTTAAGGAGGAGCTACCTAGTCGGCTACATTATGCAGCAAGTGATCGA
ATTCCTCCAATAATAGGGCTGATTGAGGAGAGTTTTAAGGTAGAGCAGAA
GAGAACTAAGAGAAAAGAGTGTGGAGGATCACATGGGTATGACAATGCAG
TTTTCTCCATGAGGACCATTTTTATTGGTCATGGTCCTCAATTTGCAAGG
GGGAAGAAGGTGCCATCTTTTGAGAATGTTCAGATATATAACTTGGTTAC
TTCAATTCTTAAGATACCGGGTGCTCCAAATAATGGGTCATCATCATTTC
CTGCATCTATGCTTTTGCCTAGCCAGTAA
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protein sequence of Tc09v2_p007810.1

>Tc09v2_p007810.1 ID=Tc09v2_p007810.1|Name=Tc09v2_p007810.1|organism=Theobroma cacao|type=polypeptide|length=493bp
MTSSDSLSQTKPIPIPTQEEDPSSQSTALLSFNTDSSLDPSAKESPSKPT
TTIVFIALILLTCVALSAAFAFAFLFYSSPSSSSSSSATVHNLSRPLKKL
EKPVVLLISSDGFRFGYQFKTPTPNIHRLIANGTEAEMGLIPVFPTLTFP
NHYSIVTGLYPAYHGIINNYFVDPNTGEVFTMASHEPKWWLGEPLWETVV
NHGLEAATYFWPGSEVKKGSWNCPVKFCMDYNGSVPFEDRVDTVLSYFDL
PGSEIPAFMTLYFEDPDHQGHQVGPDDPEITEAVARIDRMIGRLIDGLEK
RGVFEDVTIIMVGDHGMVGTCDKKLIFLEDLAPWTEIPKEWVQSYSPLLA
IRPPPGYAPSDIVAKMKDGLESGKVENGKFLKVYLKEELPSRLHYAASDR
IPPIIGLIEESFKVEQKRTKRKECGGSHGYDNAVFSMRTIFIGHGPQFAR
GKKVPSFENVQIYNLVTSILKIPGAPNNGSSSFPASMLLPSQ*
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