Tc09v2_t007520.1

Overview
NameTc09v2_t007520.1
Unique NameTc09v2_t007520.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1170
Properties
Property NameValue
NoteAcid phosphatase, putative isoform 1
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Product5'-nucleotidase SurE
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588375
GenbankXM_007012732.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g007520Tc09v2_g007520Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p007520.1Tc09v2_p007520.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto436473auto436473Theobroma cacaoexon
exon-auto436474auto436474Theobroma cacaoexon
exon-auto436475auto436475Theobroma cacaoexon
exon-auto436476auto436476Theobroma cacaoexon
exon-auto436477auto436477Theobroma cacaoexon
exon-auto436478auto436478Theobroma cacaoexon
exon-auto436479auto436479Theobroma cacaoexon
exon-auto436480auto436480Theobroma cacaoexon
exon-auto436481auto436481Theobroma cacaoexon
exon-auto436482auto436482Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto436483auto436483Theobroma cacaoCDS
CDS-auto436484auto436484Theobroma cacaoCDS
CDS-auto436485auto436485Theobroma cacaoCDS
CDS-auto436486auto436486Theobroma cacaoCDS
CDS-auto436487auto436487Theobroma cacaoCDS
CDS-auto436488auto436488Theobroma cacaoCDS
CDS-auto436489auto436489Theobroma cacaoCDS
CDS-auto436490auto436490Theobroma cacaoCDS
CDS-auto436491auto436491Theobroma cacaoCDS
CDS-auto436492auto436492Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t007520.1 ID=Tc09v2_t007520.1|Name=Tc09v2_t007520.1|organism=Theobroma cacao|type=mRNA|length=1170bp
ATGACCACTTCCGTGAAGAACAACTTCCTACCTCCTTCTTTGATCTCCAA
TCTCCAGCAAGTTCTGATATCCCGAAACGACGCCGTGGAACACCAATCCA
CCAACTCCTTCGACTCAACCTCCTCATTATCTTCCCGTTCACGAAATGCC
AAGCCAAACACGGCGAACGTGGAGCCAGATTGCTCTAAGCCAGTGCTTCT
GATCACCAATGGTGAAGGAATCGATTCACCCGGCCTCACTTTCCTCGTTC
AAGCTCTGCTCTCCGACGGTCGCTTCAGTCTCCACGTCTGCGCTCCTCAA
TCGGATAAATCGGTTGCCGGTCATTCCGTGACGGTGCGTGAGACGGTTGC
TGTATGTTCAGTGGAAATGAACGGTGCCACTGCTTTTGAAGTTTCAGGAA
CTCCTGTGGATTGTGTCTCGTTAGCTCTGTCCGGAGCATTGTTTTCATGG
TCGAAGCCTGTTTTGTTGATTAGTGGAATTAACGGAGGATCCAGCGGTGG
CCGTAATATGTATTACTCAGGAGCTGTTGCTGCTGCTAGAGAGGCACTAA
TTTGTGGTGTGCCATCTCTTTGCCTGTCATTCAACTGGAAGAAAGAGGTG
AGCTGTGAAAGTGATTTGAAGAATGCGGCCAATGTCTGTTTGCCTTTAAT
ATTCGCAGCTGTAAGGGATATTGAGAGGAGAAATTTCCCGGAAAGTTGCT
TACTGAATATACAAATCCCTTCTTGTCCCCTAGCAAACAAGGGATTCAAA
TTGACCAGGCAGAGCCTATGGAGGTCCCCTTTAAGCTGGAAAGCTGTGTC
AGCAAATAGGCATCCTGCTGCTGGCCAATATTTGTCTAATCAGCAAAGCC
TTGGTATTAAACTTGCACAACTCAGTCGAGATGCATCTGCAGCCGGTGCA
GCAAGGCGTTTGAACTCACATAGGCAGAATGTTGAAATTGAATCTGTTGG
TATTGCTGGAAAACTGAATGGCCAACAAACAATCAAAAAATACTTTCGCT
TAGAGGTCTTGGAAAAGGAGACAGAAGATGCAGATGATAATCTAGATTTT
AGAGCAGTAGAAGACGGATATGTTGCTGTAACTCCCTTATGTTTATCATC
AACCGATCAATCCAAGATTGAAACACAGGTTTCAAACTGGATTACAGTTG
CACTTGGCAGGAGGCAATGA
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protein sequence of Tc09v2_p007520.1

>Tc09v2_p007520.1 ID=Tc09v2_p007520.1|Name=Tc09v2_p007520.1|organism=Theobroma cacao|type=polypeptide|length=390bp
MTTSVKNNFLPPSLISNLQQVLISRNDAVEHQSTNSFDSTSSLSSRSRNA
KPNTANVEPDCSKPVLLITNGEGIDSPGLTFLVQALLSDGRFSLHVCAPQ
SDKSVAGHSVTVRETVAVCSVEMNGATAFEVSGTPVDCVSLALSGALFSW
SKPVLLISGINGGSSGGRNMYYSGAVAAAREALICGVPSLCLSFNWKKEV
SCESDLKNAANVCLPLIFAAVRDIERRNFPESCLLNIQIPSCPLANKGFK
LTRQSLWRSPLSWKAVSANRHPAAGQYLSNQQSLGIKLAQLSRDASAAGA
ARRLNSHRQNVEIESVGIAGKLNGQQTIKKYFRLEVLEKETEDADDNLDF
RAVEDGYVAVTPLCLSSTDQSKIETQVSNWITVALGRRQ*
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