Tc09v2_t004290.1

Overview
NameTc09v2_t004290.1
Unique NameTc09v2_t004290.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length423
Properties
Property NameValue
NoteGlutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Productglutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588017
GenbankXM_018127155.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g004290Tc09v2_g004290Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p004290.1Tc09v2_p004290.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto429221auto429221Theobroma cacaoexon
exon-auto429222auto429222Theobroma cacaoexon
exon-auto429223auto429223Theobroma cacaoexon
exon-auto429224auto429224Theobroma cacaoexon
exon-auto429225auto429225Theobroma cacaoexon
exon-auto429226auto429226Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto429227auto429227Theobroma cacaoCDS
CDS-auto429228auto429228Theobroma cacaoCDS
CDS-auto429229auto429229Theobroma cacaoCDS
CDS-auto429230auto429230Theobroma cacaoCDS
CDS-auto429231auto429231Theobroma cacaoCDS
CDS-auto429232auto429232Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t004290.1 ID=Tc09v2_t004290.1|Name=Tc09v2_t004290.1|organism=Theobroma cacao|type=mRNA|length=423bp
ATGGGGAGCAGAGCTTTGCTGATGCTCACCAACTTCAAGTTTAAAAGCAG
CTTTGCTTCTTCTTCTTCAAAACCCTTTTATCTTGTTAAGAGTAGTCCCA
CAATCCGGAAGTTATCCACGAAAACGAGGTCGTCTTTGCAGCCACCGGAT
GTGCGTCGTCTGGCCGAAACAGCTCGTATTTCACTCGCCCCAAATGAGGT
TGAAGAATTTGCTCCCAAAATTCGACAAGTGATAGACTGGTTTGGGCAAC
TTCAAGCTGTTGATCTTGACAGTGTCGAGCCGGCTTTTAGAGCTGACACT
GAAGGTGATAATTTGCGTGAAGATGTCCCTGAAACATTTGAGAATAAGGA
AGCACTGATAGCGTCTGTTCCAAGCTACAAGGAGCCATATATCAAAGTTC
CTAAAGTATTGAACAAGGAGTAA
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protein sequence of Tc09v2_p004290.1

>Tc09v2_p004290.1 ID=Tc09v2_p004290.1|Name=Tc09v2_p004290.1|organism=Theobroma cacao|type=polypeptide|length=141bp
MGSRALLMLTNFKFKSSFASSSSKPFYLVKSSPTIRKLSTKTRSSLQPPD
VRRLAETARISLAPNEVEEFAPKIRQVIDWFGQLQAVDLDSVEPAFRADT
EGDNLREDVPETFENKEALIASVPSYKEPYIKVPKVLNKE*
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