Tc09v2_t002670.1

Overview
NameTc09v2_t002670.1
Unique NameTc09v2_t002670.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1743
Properties
Property NameValue
NoteLeucine aminopeptidase 2, chloroplastic
Model evidenceSupporting evidence includes similarity to: 22 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productleucine aminopeptidase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587844
GenbankXM_007011869.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g002670Tc09v2_g002670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p002670.1Tc09v2_p002670.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto424925auto424925Theobroma cacaoexon
exon-auto424926auto424926Theobroma cacaoexon
exon-auto424927auto424927Theobroma cacaoexon
exon-auto424928auto424928Theobroma cacaoexon
exon-auto424929auto424929Theobroma cacaoexon
exon-auto424930auto424930Theobroma cacaoexon
exon-auto424931auto424931Theobroma cacaoexon
exon-auto424932auto424932Theobroma cacaoexon
exon-auto424933auto424933Theobroma cacaoexon
exon-auto424934auto424934Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto424935auto424935Theobroma cacaoCDS
CDS-auto424936auto424936Theobroma cacaoCDS
CDS-auto424937auto424937Theobroma cacaoCDS
CDS-auto424938auto424938Theobroma cacaoCDS
CDS-auto424939auto424939Theobroma cacaoCDS
CDS-auto424940auto424940Theobroma cacaoCDS
CDS-auto424941auto424941Theobroma cacaoCDS
CDS-auto424942auto424942Theobroma cacaoCDS
CDS-auto424943auto424943Theobroma cacaoCDS
CDS-auto424944auto424944Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t002670.1 ID=Tc09v2_t002670.1|Name=Tc09v2_t002670.1|organism=Theobroma cacao|type=mRNA|length=1743bp
ATGGTCGCCACCGTTGTAGCGTCCTTAGCTACGTCTCTTTTAGCTTCATC
AGTTTCTCACTCTTCTCCTTCTACTACTTTGTTTTTCACTAAGTTGCGGT
CTTCGTCTGGGCTCAGATTTTCTTTTGCTGTCGCTCCTTTGTGTTCTCGA
AGAGCCAAGTTCATGGCACACACTATCGCTCGCGCCACTCTTGGCCTTAC
TCAGCCAGCCAACATCGAACACCCCAGGATCTCTTTTGCTGCAAAAGAGA
TCGATGTGGCAGAATGGAAAGGGGACATACTTGCAGTTGGGGTCACTGAG
AAAGACATGACCAAGGATGAAAACTCCAAGTTTCAAAACTCAATTTTAAA
AAAATTAGATGGCCTGTTGGGCGGTCTCTTAGCTGAGGTCTCTTCGGAAG
AGGATTTCACAGGAAAAGCTGGTCAGTCGACAGTTCTTAGACTTCCAGGC
CTTGGCTCTAAAAGGGTTGGCTTGATTGGGCTTGGACAGTCAGTTTTATC
TCCAGCTGCTTTTCGTGGTCTTGGTGAGGCTGTCGCTGCAGCTGCAAAGA
CTGCTCAAGCTAGTAGTGTGGCTGTCGCCCTTGCCTCCTCAGAAGGCCTC
TCAAATGAGTCAAAGCTCAGCACTGCTTCAGCAATAGCATCTGGGACGGT
GCTGGGAGTATATGAAGATAATAGATACAAGTCAGAGTCAAAGAAACCAC
AACTTAAATCTGTGGATATTCTAGGTCTTGGAACTGGACCAGATTTGGAG
AAGAAGCTCAAGTATGCTGAAGATGTTTCATCTGCTATAATTTTTGGAAG
AGAGCTTGTGAATTCACCAGCCAATGTACTTACCCCTGCTGCACTAGCAG
CAGAGGCTTCAAAGATTGCTTCGTCGTACAGTGATGTTATATCTGCAACC
ATCTTGAGTGCAGAGCAGTGCAAGGAGTTGAAGATGGGATCTTATCTGGG
AGTTGCTGCGGCATCTGCAAATCCCCCTCATTTTATCCATTTGTGCTACA
AACCCCCAAGTGGACCTATTAAAGCCAAGTTAGCATTAGTTGGAAAAGGA
TTGACTTTTGACAGTGGTGGCTACAATATCAAGACTGGAGTTGGTTGTTC
GATTGAGCTCATGAAAACTGACATGGGAGGTTCTGCAGCAGTTCTTGGCG
CAGCAAAAGCCCTTGGACAAATCAAACCTCCTGGAGTAGAGGTTCATTTT
ATTGTTGCATCTTGTGAAAACATGATAAGTGGAACAGGTATGAGACCTGG
AGATATCATCACAGCTTCAAATGGAAAGACAATTGAGGTTAATAACACTG
ACGCAGAAGGCAGGCTTACGCTTGCAGATGCTTTGGTATATGCTTGCAAC
CAAGGTGTTGAGAAGATAGTTGACCTGGCAACACTAACTGGGGCTTGTGT
AGTTGCTCTTGGACCGTCAATTGCAGGTGTCTTCACACCCAGCGATAATC
TGGCAAAGGAGGTATTTGAAGCTTCAGAGGTCAGTGGTGAGAAATTTTGG
AGGATGCCACTAGAGGAAAGCTATTGGGAGTCAATGAAATCAGGAGTGGC
TGATATGGTAAACACTGGTGGTCGTCAAGGTGGCGCTATCACTGCTGCTT
TGTTCTTGAAACAGTTTGTTGATGAGAAAGTACAGTGGATGCACATCGAC
TTGGCTGGCCCTGTCTGGAATGATAAGAAGCGTGTGGCAACAGGATTTGG
CATTTCAACTTTGGTGGAATGGGTTCTGAAAAACTCTTCTTAA
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protein sequence of Tc09v2_p002670.1

>Tc09v2_p002670.1 ID=Tc09v2_p002670.1|Name=Tc09v2_p002670.1|organism=Theobroma cacao|type=polypeptide|length=581bp
MVATVVASLATSLLASSVSHSSPSTTLFFTKLRSSSGLRFSFAVAPLCSR
RAKFMAHTIARATLGLTQPANIEHPRISFAAKEIDVAEWKGDILAVGVTE
KDMTKDENSKFQNSILKKLDGLLGGLLAEVSSEEDFTGKAGQSTVLRLPG
LGSKRVGLIGLGQSVLSPAAFRGLGEAVAAAAKTAQASSVAVALASSEGL
SNESKLSTASAIASGTVLGVYEDNRYKSESKKPQLKSVDILGLGTGPDLE
KKLKYAEDVSSAIIFGRELVNSPANVLTPAALAAEASKIASSYSDVISAT
ILSAEQCKELKMGSYLGVAAASANPPHFIHLCYKPPSGPIKAKLALVGKG
LTFDSGGYNIKTGVGCSIELMKTDMGGSAAVLGAAKALGQIKPPGVEVHF
IVASCENMISGTGMRPGDIITASNGKTIEVNNTDAEGRLTLADALVYACN
QGVEKIVDLATLTGACVVALGPSIAGVFTPSDNLAKEVFEASEVSGEKFW
RMPLEESYWESMKSGVADMVNTGGRQGGAITAALFLKQFVDEKVQWMHID
LAGPVWNDKKRVATGFGISTLVEWVLKNSS*
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