Tc09v2_t002470.1

Overview
NameTc09v2_t002470.1
Unique NameTc09v2_t002470.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1344
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productshikimate O-hydroxycinnamoyltransferase
NoteShikimate O-hydroxycinnamoyltransferase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587820
GenbankXM_018127314.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g002470Tc09v2_g002470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p002470.1Tc09v2_p002470.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto424620auto424620Theobroma cacaoexon
exon-auto424621auto424621Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto424622auto424622Theobroma cacaoCDS
CDS-auto424623auto424623Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t002470.1 ID=Tc09v2_t002470.1|Name=Tc09v2_t002470.1|organism=Theobroma cacao|type=mRNA|length=1344bp
ATGGAGATTACCGTAAAGGGATCAAGCCTAGTACGCCCTGCTAAAGAAAC
GCCCAAAGAGAGCCACTGGGTCTCAAATCTGGACATGGTGGCGACACCAT
ATTATGTCCCCCTGGTGTACTTCTACAAACCAAATGGTTCTTCAGATTTC
TTTAAAGGGCAAGTGCTTAAGGAGGCTTTAAGCAAGACTCTTGTGCCATT
TTACCCCATGGCTGGGAGGTTGGGAAGCGATGAAAATGGTAGGTTCGAGA
TAATATGCAACGCAGAGGGAGTTCTATGGGTAGAAGCTGAAACTACTTGT
GCTGTGGATGACTTGGGAAATTTTGCTCCTAGCTTAAAACTCCGGCAACT
AGTTCCAACAGTTGATTACTCGAAAGATACCTTCTCTCACCCGCTGTTTA
TGGCCCAGGTAACTGCTTTCAAATGCGGTGCAGTCTCTCTTGGAATCGGA
ATTCACCACACTTTGGTGGATGGCACAGCTTTCCTTCACTTCTTCAACAG
TTGGTCCGAGATAGCAAGAGGCTTGCCCCTAATCAGGGTGGCGCCACTTA
TTGACAGAACCCTTCTCCGAGCACGAGTGCCACCAACCCCTAGATTTCAT
CATGCTGAATATGATCCACCTCCTCCCTTAAACACCTCAATGTCAATCTT
CAATTCTCACCCTAAGCCTAAACCCTCATCTGTATCTGTTTTTAAGATCA
CACTCAATCAACTTAATACCCTAAAAGCCATGTCATTCAAGAATGAAAAT
TCAACTAAGTACAGCACCTACACTATCCTAGCTGCACATATATGGCGTTG
TGCCTGTAAAGCTCGAGGCCTCTTGGATGATCAACCAACCAAGTTATACG
TGCCAACAAATGGACGCCCCAGACTACATCCTCCCCTCCCATCAGCCTAC
CTGGGCAATGTGACATTTATGGCTTCATCAATTTCTGTGTCTGGAAATCT
CCAATCAGAACCATTTATGAACACCATAGAGCGAATTCATGGAACATTGA
AAAGGGTGGACAATGAATATCTAAGATCAGCTCTTGACTACCTAGAAAAA
CTGCCAGATGTAACTACTGCCAGGAGAGAAGCACACACTGCCCAGTGCCC
AAATCTAAGTATCATCAATTGGATGCGACTCCCTGTACATGATGCAAATT
TTGGGTGGGGTCGGCCCATATACATGGGCCCGGCAAATGTCGTCCATGAA
GGAAAAATATACCTACTGCCAAGTCCAACTGATGATGGGAGCCTGTCATT
GGTAGCATGCCTAGAAACCTCTCATATGAAACCTTTTCAGAAGCATCTTT
ACGAAGGCTTAATGTCATTTGACAAAATAAGGGCTCGATATTAG
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protein sequence of Tc09v2_p002470.1

>Tc09v2_p002470.1 ID=Tc09v2_p002470.1|Name=Tc09v2_p002470.1|organism=Theobroma cacao|type=polypeptide|length=448bp
MEITVKGSSLVRPAKETPKESHWVSNLDMVATPYYVPLVYFYKPNGSSDF
FKGQVLKEALSKTLVPFYPMAGRLGSDENGRFEIICNAEGVLWVEAETTC
AVDDLGNFAPSLKLRQLVPTVDYSKDTFSHPLFMAQVTAFKCGAVSLGIG
IHHTLVDGTAFLHFFNSWSEIARGLPLIRVAPLIDRTLLRARVPPTPRFH
HAEYDPPPPLNTSMSIFNSHPKPKPSSVSVFKITLNQLNTLKAMSFKNEN
STKYSTYTILAAHIWRCACKARGLLDDQPTKLYVPTNGRPRLHPPLPSAY
LGNVTFMASSISVSGNLQSEPFMNTIERIHGTLKRVDNEYLRSALDYLEK
LPDVTTARREAHTAQCPNLSIINWMRLPVHDANFGWGRPIYMGPANVVHE
GKIYLLPSPTDDGSLSLVACLETSHMKPFQKHLYEGLMSFDKIRARY*
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