Tc09v2_t002080.1

Overview
NameTc09v2_t002080.1
Unique NameTc09v2_t002080.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length666
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ProductATP synthase subunit b', chloroplastic
NoteATP synthase subunit b' isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID108663492
GenbankXM_018128252.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g002080Tc09v2_g002080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p002080.1Tc09v2_p002080.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto423980auto423980Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto423981auto423981Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t002080.1 ID=Tc09v2_t002080.1|Name=Tc09v2_t002080.1|organism=Theobroma cacao|type=mRNA|length=666bp
ATGGCCATCATGATCATGGCCTCCTCAAAATCTATAGTCCCAGTTACATC
CTCCTCCCTTCCTTCCAAACCCAAACTCCAACAAATCCAACAACTTTCCC
TCCCAAAAATCCCCACCCCAAAATTCTTGAAATCCCAACAAATCCTCTCC
TTTTCTTCCTCTACTCTCAAATCCATCTCCCTCTTGACCGCCACCTCTTT
ATCCTTTGCCCCACCTTCTCTTGCGGAGGAAATAGAGAAGGCTGCTCTTT
TTGACTTCAACTTAACTCTTCCGATTATGATGGTTCAGTTCTTGCTCCTC
ATGTTTGCTCTTGACAAGATCTACTATACCCCACTCGGGAAATTCATGGA
TGAGAGAGATGCTGCCATAAAAGAGAAACTTGCCAGCGTGAAGGACACCT
CTGAGGAAGTGAAGCAGCTTGAAGAGCAGGCTACAGCTATCATGAGAGCT
GCAAGAGCTGAAATCTCAGCTGCTTTAAACAAGATGAAGAAAGAGACCCA
GTTGGAACTTGAGGGGAAGCTGGCTGAAGGAAGGAAGAAAGTTGAGGCTG
AGTTACAGGAAGCTTTGGCTAATTTGGAGAAACAAAAGGAAGAGACCGTC
AAGGCACTTGATTCCCAGATTTCTGCTCTCAGTCAGGAGATTGTCAAGAA
GGTGCTTCCTCTCTAA
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protein sequence of Tc09v2_p002080.1

>Tc09v2_p002080.1 ID=Tc09v2_p002080.1|Name=Tc09v2_p002080.1|organism=Theobroma cacao|type=polypeptide|length=222bp
MAIMIMASSKSIVPVTSSSLPSKPKLQQIQQLSLPKIPTPKFLKSQQILS
FSSSTLKSISLLTATSLSFAPPSLAEEIEKAALFDFNLTLPIMMVQFLLL
MFALDKIYYTPLGKFMDERDAAIKEKLASVKDTSEEVKQLEEQATAIMRA
ARAEISAALNKMKKETQLELEGKLAEGRKKVEAELQEALANLEKQKEETV
KALDSQISALSQEIVKKVLPL*
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