Tc09v2_t001670.2

Overview
NameTc09v2_t001670.2
Unique NameTc09v2_t001670.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1482
Properties
Property NameValue
NoteInosine-5'-monophosphate dehydrogenase 2
Model evidenceSupporting evidence includes similarity to: 25 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productinosine-5'-monophosphate dehydrogenase 2, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587734
GenbankXM_018128178.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g001670Tc09v2_g001670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p001670.2Tc09v2_p001670.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto422854auto422854Theobroma cacaoexon
exon-auto422855auto422855Theobroma cacaoexon
exon-auto422856auto422856Theobroma cacaoexon
exon-auto422857auto422857Theobroma cacaoexon
exon-auto422858auto422858Theobroma cacaoexon
exon-auto422859auto422859Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto422860auto422860Theobroma cacaoCDS
CDS-auto422861auto422861Theobroma cacaoCDS
CDS-auto422862auto422862Theobroma cacaoCDS
CDS-auto422863auto422863Theobroma cacaoCDS
CDS-auto422864auto422864Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t001670.2 ID=Tc09v2_t001670.2|Name=Tc09v2_t001670.2|organism=Theobroma cacao|type=mRNA|length=1482bp
ATGGAAGACGGGTTCGCAGCCTCAAAGCTGTTCAGCCAAGGCTACTCTTA
TACCTACGACGATTGTATATTTCTCCCTCACTACATTGACTTCCCTACCG
ATGCCGTATCTTTGTCCACCAACCTCTCCCGCAACGTCCGCCTCTCTATC
CCCTGCGTTGCTTCTCCTATGGACACTGTCTCCGAAGCCTACATGGCTGC
TGCCATGGCTGCCCTTGGTGGCATCGCTATTGTCCATTCCAACTGTACTT
CTGCCCAACAAGCCTCCATCATCCGCTTTGCCAAGTCTCTCCGTCTCCCC
ATTACTCCCTCTGTTGCATTTGCGTCGCCAGATACTCTTCCTGCTGCTGC
TCCTCATGGAAGATATATTTTTGTTACCGACTCAGGCACTCTACCATCCA
AGCTGTTGCGTTGTGTTGCAACTTCTGATTGTGAGAACTTGAAAGGTGAA
GAAGTGAAAATCTTTGATTGCAAGCGGGATTGTAAGAGTGTGGAGTATGT
TCCTTGGAATTATGATCTGGAAAAGATTGAGGCCATTTTGGATGAAAAGA
AAAGTGATATTGTGGTGTTGGAAAGGGATGGTGAGGTGGTGAATGTGGTG
ATCAAGGAGGATCTGAAGAGGCTAAAAGGGTATCCAAAATTGGGGGCAGG
GACTGTGGGGCCTGATGGAGAATGGATGGTAGGGGCTGCAATGGGGACAA
GGGAGTCTGATAAGGAGAGGTTGGAGCATGTGGTGAAGGCAGGGGCCAAT
GTGGTGGTGTTGGATAGTTCTCAGGGGAATTCTATATATCAGATTGAGAT
GATCAAGTTCATCAAAAAGACATATCCTCAGCTGGATGTGATTGGTGGGA
ATGTTGTGACTATGTATCAAGCACAGAATTTGATTCAGGCAGGTGTAGAT
GGGTTACGAGTTGGGATGGGATCTGGGTCAATTTGCACCACACAAGAGGT
TTGTGCTGTTGGACGAGGACAGGCAACTGCTGTTTACAAGGTATCATCTA
TTGCTGCGCAACATGGTGTGCCTGTCATTGCTGATGGTGGGATTTCAAAC
TCTGGACACATTGTCAAGGCTTTGGTTTTGGGGGCATCTACTGTTATGAT
GGGAAGCTTTTTAGCTGGAAGCACTGAGGCTCCTGGAGCTTATGAGTATA
AGAATGGTCAACGTATCAAAAAATATCGTGGCATGGGCTCCCTAGAAGCA
ATGACTAAGGGGAGTGATCAGAGATATTTGGGTGATACAGCCAAGCTGAA
GATTGCCCAGGGAGTTGTTGGAGCAGTTGCGGATAAAGATTCTGTACTAA
AGTTTATACCTTACGCAATGCAAGCAGTCAAGCAAGGGTTCCAGGACCTT
GGTGCTTCCTCTTTACCATCTGCACACGAGCTCTTAAGATCCGGCACATT
GAGGCTAGAGGTCCGGACCGGTGCAGCACAGGTTGAAGGTGGAGTTCATG
GTCTGGTTTCATATGAAAAGAAATCCTTTTGA
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protein sequence of Tc09v2_p001670.2

>Tc09v2_p001670.2 ID=Tc09v2_p001670.2|Name=Tc09v2_p001670.2|organism=Theobroma cacao|type=polypeptide|length=494bp
MEDGFAASKLFSQGYSYTYDDCIFLPHYIDFPTDAVSLSTNLSRNVRLSI
PCVASPMDTVSEAYMAAAMAALGGIAIVHSNCTSAQQASIIRFAKSLRLP
ITPSVAFASPDTLPAAAPHGRYIFVTDSGTLPSKLLRCVATSDCENLKGE
EVKIFDCKRDCKSVEYVPWNYDLEKIEAILDEKKSDIVVLERDGEVVNVV
IKEDLKRLKGYPKLGAGTVGPDGEWMVGAAMGTRESDKERLEHVVKAGAN
VVVLDSSQGNSIYQIEMIKFIKKTYPQLDVIGGNVVTMYQAQNLIQAGVD
GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQHGVPVIADGGISN
SGHIVKALVLGASTVMMGSFLAGSTEAPGAYEYKNGQRIKKYRGMGSLEA
MTKGSDQRYLGDTAKLKIAQGVVGAVADKDSVLKFIPYAMQAVKQGFQDL
GASSLPSAHELLRSGTLRLEVRTGAAQVEGGVHGLVSYEKKSF*
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