Tc09v2_t001670.1

Overview
NameTc09v2_t001670.1
Unique NameTc09v2_t001670.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1482
Properties
Property NameValue
NoteInosine-5'-monophosphate dehydrogenase 2
Model evidenceSupporting evidence includes similarity to: 22 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Productinosine-5'-monophosphate dehydrogenase 2, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587734
GenbankXM_018128179.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g001670Tc09v2_g001670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p001670.1Tc09v2_p001670.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto422841auto422841Theobroma cacaoexon
exon-auto422842auto422842Theobroma cacaoexon
exon-auto422843auto422843Theobroma cacaoexon
exon-auto422844auto422844Theobroma cacaoexon
exon-auto422845auto422845Theobroma cacaoexon
exon-auto422846auto422846Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto422847auto422847Theobroma cacaoCDS
CDS-auto422848auto422848Theobroma cacaoCDS
CDS-auto422849auto422849Theobroma cacaoCDS
CDS-auto422850auto422850Theobroma cacaoCDS
CDS-auto422851auto422851Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t001670.1 ID=Tc09v2_t001670.1|Name=Tc09v2_t001670.1|organism=Theobroma cacao|type=mRNA|length=1482bp
ATGGAAGACGGGTTCGCAGCCTCAAAGCTGTTCAGCCAAGGCTACTCTTA
TACCTACGACGATTGTATATTTCTCCCTCACTACATTGACTTCCCTACCG
ATGCCGTATCTTTGTCCACCAACCTCTCCCGCAACGTCCGCCTCTCTATC
CCCTGCGTTGCTTCTCCTATGGACACTGTCTCCGAAGCCTACATGGCTGC
TGCCATGGCTGCCCTTGGTGGCATCGCTATTGTCCATTCCAACTGTACTT
CTGCCCAACAAGCCTCCATCATCCGCTTTGCCAAGTCTCTCCGTCTCCCC
ATTACTCCCTCTGTTGCATTTGCGTCGCCAGATACTCTTCCTGCTGCTGC
TCCTCATGGAAGATATATTTTTGTTACCGACTCAGGCACTCTACCATCCA
AGCTGTTGCGTTGTGTTGCAACTTCTGATTGTGAGAACTTGAAAGGTGAA
GAAGTGAAAATCTTTGATTGCAAGCGGGATTGTAAGAGTGTGGAGTATGT
TCCTTGGAATTATGATCTGGAAAAGATTGAGGCCATTTTGGATGAAAAGA
AAAGTGATATTGTGGTGTTGGAAAGGGATGGTGAGGTGGTGAATGTGGTG
ATCAAGGAGGATCTGAAGAGGCTAAAAGGGTATCCAAAATTGGGGGCAGG
GACTGTGGGGCCTGATGGAGAATGGATGGTAGGGGCTGCAATGGGGACAA
GGGAGTCTGATAAGGAGAGGTTGGAGCATGTGGTGAAGGCAGGGGCCAAT
GTGGTGGTGTTGGATAGTTCTCAGGGGAATTCTATATATCAGATTGAGAT
GATCAAGTTCATCAAAAAGACATATCCTCAGCTGGATGTGATTGGTGGGA
ATGTTGTGACTATGTATCAAGCACAGAATTTGATTCAGGCAGGTGTAGAT
GGGTTACGAGTTGGGATGGGATCTGGGTCAATTTGCACCACACAAGAGGT
TTGTGCTGTTGGACGAGGACAGGCAACTGCTGTTTACAAGGTATCATCTA
TTGCTGCGCAACATGGTGTGCCTGTCATTGCTGATGGTGGGATTTCAAAC
TCTGGACACATTGTCAAGGCTTTGGTTTTGGGGGCATCTACTGTTATGAT
GGGAAGCTTTTTAGCTGGAAGCACTGAGGCTCCTGGAGCTTATGAGTATA
AGAATGGTCAACGTATCAAAAAATATCGTGGCATGGGCTCCCTAGAAGCA
ATGACTAAGGGGAGTGATCAGAGATATTTGGGTGATACAGCCAAGCTGAA
GATTGCCCAGGGAGTTGTTGGAGCAGTTGCGGATAAAGATTCTGTACTAA
AGTTTATACCTTACGCAATGCAAGCAGTCAAGCAAGGGTTCCAGGACCTT
GGTGCTTCCTCTTTACCATCTGCACACGAGCTCTTAAGATCCGGCACATT
GAGGCTAGAGGTCCGGACCGGTGCAGCACAGGTTGAAGGTGGAGTTCATG
GTCTGGTTTCATATGAAAAGAAATCCTTTTGA
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protein sequence of Tc09v2_p001670.1

>Tc09v2_p001670.1 ID=Tc09v2_p001670.1|Name=Tc09v2_p001670.1|organism=Theobroma cacao|type=polypeptide|length=494bp
MEDGFAASKLFSQGYSYTYDDCIFLPHYIDFPTDAVSLSTNLSRNVRLSI
PCVASPMDTVSEAYMAAAMAALGGIAIVHSNCTSAQQASIIRFAKSLRLP
ITPSVAFASPDTLPAAAPHGRYIFVTDSGTLPSKLLRCVATSDCENLKGE
EVKIFDCKRDCKSVEYVPWNYDLEKIEAILDEKKSDIVVLERDGEVVNVV
IKEDLKRLKGYPKLGAGTVGPDGEWMVGAAMGTRESDKERLEHVVKAGAN
VVVLDSSQGNSIYQIEMIKFIKKTYPQLDVIGGNVVTMYQAQNLIQAGVD
GLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAAQHGVPVIADGGISN
SGHIVKALVLGASTVMMGSFLAGSTEAPGAYEYKNGQRIKKYRGMGSLEA
MTKGSDQRYLGDTAKLKIAQGVVGAVADKDSVLKFIPYAMQAVKQGFQDL
GASSLPSAHELLRSGTLRLEVRTGAAQVEGGVHGLVSYEKKSF*
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