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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns |
Product | transcription initiation factor TFIID subunit 5 |
Note | Transcription initiation factor TFIID subunit 5 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t001480.1 ID=Tc09v2_t001480.1|Name=Tc09v2_t001480.1|organism=Theobroma cacao|type=mRNA|length=2007bp ATGGATAATATGCAGGCAGTGAATAGCTTCGTGGCAGCTTATCTGAAGAA GAAAGGATTCAAGGAAGCGGAGCAATTGTTGGAGGATCTTCAGAGCAAGG ATTCCGCTCCCATCGATTTCCACAACGACCCCGAACTCGCTAAGTTCATT CACCACTTCTCCCAATCGGAGGATGATGTGGTACGCTACCAGGATGGATA TAGCAAACTGAGGTCTTGGACTTATAGTTCACTAGATTTATATAAGCATG AGTTGCTTCGTGTGCTTTATCCTGTCTTTATACATTCATTCATGGATCTG GTGGCAAAAGGACATCTGCAAGAGGCTAGAACATTTTTTAATGCCTTTCG TGAAGACCATGAACTGATGCACTCACGTGACCTTCAAAAGCTGGAAGGAG TTCTCACTCAGTCTCATTTGGAGGAGATGGAATTTGCTCGTTCTCTTAGG CAGAATAAAGTTAACATCAAGATATGTCAGTATTCCTACGACCTTCTGCT GCAGTATTTGCATAAAACACAGTCCACTGCTATGCTTGGGGTTATTAATG AACACATCAACTTCCAAGTTTCTCCTGGACAGCCCACTTCAATTTCTGAT GATGCAGAGGTTGTAACACTTATTGGAAGCTGCCAGGATGCAGCTAATCA GATAAATCAGAAAGAAATACATTGGGGGTTGCTTGAAGACTCCTTAGAAG AACGCTTGGAGAAAGCAGGAGGTTTGCTTTCAGATTCTGAAAAGACAGAA GGGGAGAACAAAGAGGGGGATGTAGATGAGACTAAGAAAAGATCAGTTGA AGGTGGAAAGCAAGGTGCTTCAACTAAAAAGTTGAAAAAGGACAAAGCTG CTAGTGCAACAGCAAAAAGTGCTCGCCCTGAGGCTAACACCACCTCCACT GCACCCCGAGTAAAACCAGAGCTCCCTTTGCCAGTAATGCCAACAGAGGT AGAACAGTCAATTCTTGAGGACTTAAGAAACCGTGTACAGTTGAGTAGTG TTGCATTGCCATCTGTCAGCTTTTACACTTTTCTCAACACACATAACGGT TTGAACTGTTCATCAATTTCGCATGATGGGTCTTTGGTTGCTGGTGGATT CTCAGACTCGTCATTGAAGATTTGGGATATGGCAAAGCTAGGCCAGCAAG CTGGCAGTTCTATTTTGCAGGGTGAAAATGATTCTACTTCAAGTAAACAT GTTGTGGGACCAAATGGTGTGAAAAGATCCTATACATTGTTGCAGGGTCA CTCAGGACCAGTTTATTCAGCCAACTTTAGTCCTCTTGGGGATTTTATTC TTTCCTCTTCTGCAGATACAACAATTCGCCTGTGGAGCACAGAACTAAAT GCAAATCTTGTTTGCTACAAGGGTCATAATTATCCTGTATGGGATGTTCA GTTTAGTCCTGTAGGACACTATTTTGCCAGTGCTTCGCATGATCGAACAG CAAGGATTTGGTCGATGGATAAAATACAACCTATGAGGATAATGGCAGGG CACTTGTCTGATGTCGATTGTGTGCAATGGCATGCCAACTGCAACTATAT TGCCACTGGCTCTAGTGACAAAACAGTTAGATTGTGGGATGTGCAAAGTG GAGAATGTGTTCGGATTTTCATTGGTCATAGGAGTATGATTTTGTCATTA GCAATGTCACCTGACGGTCGATATATGGCATCTGGTGATGAAGATGGCAC AATCATGATGTGGGACCTGTCTAGTGGACGCTGCGTTACACCTTTGATGG GTCACAGCTCGTGTGTGTGGACGCTTGCTTTCAGTTGTGAAGGTTCACTT CTGGCATCTGGATCTGCTGATTGCACTGTAAAATTGTGGGATGTAACAAC AAGCACAAAGGTCCCAAAGAATGAAGAAAAGAGTGGAAATCCAAACAGAC TAAGATCGTTGAAAACCTTGCCAACCAAGCTTACTCCAGTTTATAGTTTG CGGTTTTCCAGAAGGAATCTGCTGTTTGCAGCTGGGGCGCTCTCTAAGAA CCAGTAA back to topprotein sequence of Tc09v2_p001480.1 >Tc09v2_p001480.1 ID=Tc09v2_p001480.1|Name=Tc09v2_p001480.1|organism=Theobroma cacao|type=polypeptide|length=669bp
MDNMQAVNSFVAAYLKKKGFKEAEQLLEDLQSKDSAPIDFHNDPELAKFI HHFSQSEDDVVRYQDGYSKLRSWTYSSLDLYKHELLRVLYPVFIHSFMDL VAKGHLQEARTFFNAFREDHELMHSRDLQKLEGVLTQSHLEEMEFARSLR QNKVNIKICQYSYDLLLQYLHKTQSTAMLGVINEHINFQVSPGQPTSISD DAEVVTLIGSCQDAANQINQKEIHWGLLEDSLEERLEKAGGLLSDSEKTE GENKEGDVDETKKRSVEGGKQGASTKKLKKDKAASATAKSARPEANTTST APRVKPELPLPVMPTEVEQSILEDLRNRVQLSSVALPSVSFYTFLNTHNG LNCSSISHDGSLVAGGFSDSSLKIWDMAKLGQQAGSSILQGENDSTSSKH VVGPNGVKRSYTLLQGHSGPVYSANFSPLGDFILSSSADTTIRLWSTELN ANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDKIQPMRIMAG HLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSL AMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLMGHSSCVWTLAFSCEGSL LASGSADCTVKLWDVTTSTKVPKNEEKSGNPNRLRSLKTLPTKLTPVYSL RFSRRNLLFAAGALSKNQ* back to top
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