Tc09v2_t001390.1

Overview
NameTc09v2_t001390.1
Unique NameTc09v2_t001390.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1218
Properties
Property NameValue
Note3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial
Model evidenceSupporting evidence includes similarity to: 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Product3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587706
GenbankXM_007011654.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g001390Tc09v2_g001390Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p001390.1Tc09v2_p001390.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto422118auto422118Theobroma cacaoexon
exon-auto422119auto422119Theobroma cacaoexon
exon-auto422120auto422120Theobroma cacaoexon
exon-auto422121auto422121Theobroma cacaoexon
exon-auto422122auto422122Theobroma cacaoexon
exon-auto422123auto422123Theobroma cacaoexon
exon-auto422124auto422124Theobroma cacaoexon
exon-auto422125auto422125Theobroma cacaoexon
exon-auto422126auto422126Theobroma cacaoexon
exon-auto422127auto422127Theobroma cacaoexon
exon-auto422128auto422128Theobroma cacaoexon
exon-auto422129auto422129Theobroma cacaoexon
exon-auto422130auto422130Theobroma cacaoexon
exon-auto422131auto422131Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto422132auto422132Theobroma cacaoCDS
CDS-auto422133auto422133Theobroma cacaoCDS
CDS-auto422134auto422134Theobroma cacaoCDS
CDS-auto422135auto422135Theobroma cacaoCDS
CDS-auto422136auto422136Theobroma cacaoCDS
CDS-auto422137auto422137Theobroma cacaoCDS
CDS-auto422138auto422138Theobroma cacaoCDS
CDS-auto422139auto422139Theobroma cacaoCDS
CDS-auto422140auto422140Theobroma cacaoCDS
CDS-auto422141auto422141Theobroma cacaoCDS
CDS-auto422142auto422142Theobroma cacaoCDS
CDS-auto422143auto422143Theobroma cacaoCDS
CDS-auto422144auto422144Theobroma cacaoCDS
CDS-auto422145auto422145Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t001390.1 ID=Tc09v2_t001390.1|Name=Tc09v2_t001390.1|organism=Theobroma cacao|type=mRNA|length=1218bp
ATGCAGAGAGTGAAAGGTTTAGTAAAAGCAAGGCATTCATTTCAAAGACT
TGGGTTCCTCTCCCATCAAAGATGCTTCTCTGCACATCCAAACTATGCCC
CAAATTATGATTTCCAGGACGAGGTTTTAGTGGAAGGAAGAGCTAAATCA
AGAGCAGCCATTCTTAATAGACCTTCTGCTCTCAATGCACTTACCGCCCC
AATGGCAGCACGGTTGAAGAGATTGTATGAATCATGGGAAGAGAACCCCG
ATATTGGATTTGTCTTAATGAAGGGTAGTGGCAGGGCTTTCTGTTCTGGC
GTTGATGCTGTTACTCTCTATCACTTACTTAACGATGGGAAAGTTGAAGA
ATGTAAACGGTTTTTCGAGACACTGTATAAGTTTGTATATGTACAAGGAA
CGTATCTAAAGCCACATGTCGCAATCTTGGATGGTACAACGATGGGATGT
GGAGGTGGAATTTCTCTCCCAGGGATGTTTCGTTTAGTGACTGATAAAAC
TGTTTTTGCTAATCCAGAGACTCAATTAGGATTCCATCCTGATGCAGGGG
CTTCGTTTTATCTTTCTCGCCTACCTGGTTACTTTGGGGAATATTTAGCT
CTAACAGGAGAAAAGCTTAATGGTGTTGAAATGATTGCCTGTGGCCTTGC
TACCCACTATTGCTTAAATGCTAGACTTGCTTGGATTGAAGAACGCCTTG
GTAACATGACGAATGATGATCCCGCTGCCATAGAGTCTTCTCTTGCACAG
TATGGTGACCTTGTTTATCCAGATAGGAGCAGCGTTCTTCGCAGGATTGA
CACAATTGATAAATGTTTCAGCTGCGACACTGTTGAGGAAATTATTGATT
CTCTGGAAAATGAGGCAGCTGGTGCATATGATGACTGGTGCAAGACGGTG
CTCAAAAATATGAAAGAAGCCTCACCATTGAGCTTGAAAGTGACTCTACA
ATCTATACGAGAAGGTAGATTTCAATCTCTTGATCAGTGTCTGGCACGTG
AATATCGGATGTCCCTTGCTGGGATCTCCAAACGGGTCTCTAATGATTTC
TCTGAGGGTATTCGAGCCCGGTTAGTGGACAAGGATTTTGCTCCCAAGTG
GGACCCTCCAAGCCTGGAAGACGTGAGTAAAGACATGGTCGACTGCTACT
TCTCCTCACTCGGGGAATTAGAACCTGAGTTAGTGCTGCCAACAGCCTTG
AGAGAACCTTACATCTGA
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protein sequence of Tc09v2_p001390.1

>Tc09v2_p001390.1 ID=Tc09v2_p001390.1|Name=Tc09v2_p001390.1|organism=Theobroma cacao|type=polypeptide|length=406bp
MQRVKGLVKARHSFQRLGFLSHQRCFSAHPNYAPNYDFQDEVLVEGRAKS
RAAILNRPSALNALTAPMAARLKRLYESWEENPDIGFVLMKGSGRAFCSG
VDAVTLYHLLNDGKVEECKRFFETLYKFVYVQGTYLKPHVAILDGTTMGC
GGGISLPGMFRLVTDKTVFANPETQLGFHPDAGASFYLSRLPGYFGEYLA
LTGEKLNGVEMIACGLATHYCLNARLAWIEERLGNMTNDDPAAIESSLAQ
YGDLVYPDRSSVLRRIDTIDKCFSCDTVEEIIDSLENEAAGAYDDWCKTV
LKNMKEASPLSLKVTLQSIREGRFQSLDQCLAREYRMSLAGISKRVSNDF
SEGIRARLVDKDFAPKWDPPSLEDVSKDMVDCYFSSLGELEPELVLPTAL
REPYI*
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