Tc09v2_t001130.1

Overview
NameTc09v2_t001130.1
Unique NameTc09v2_t001130.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1596
Properties
Property NameValue
NoteMonogalactosyldiacylglycerol synthase 1, chloroplastic
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productmonogalactosyldiacylglycerol synthase, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587678
GenbankXM_007011610.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g001130Tc09v2_g001130Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p001130.1Tc09v2_p001130.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto421446auto421446Theobroma cacaoexon
exon-auto421447auto421447Theobroma cacaoexon
exon-auto421448auto421448Theobroma cacaoexon
exon-auto421449auto421449Theobroma cacaoexon
exon-auto421450auto421450Theobroma cacaoexon
exon-auto421451auto421451Theobroma cacaoexon
exon-auto421452auto421452Theobroma cacaoexon
exon-auto421453auto421453Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto421454auto421454Theobroma cacaoCDS
CDS-auto421455auto421455Theobroma cacaoCDS
CDS-auto421456auto421456Theobroma cacaoCDS
CDS-auto421457auto421457Theobroma cacaoCDS
CDS-auto421458auto421458Theobroma cacaoCDS
CDS-auto421459auto421459Theobroma cacaoCDS
CDS-auto421460auto421460Theobroma cacaoCDS
CDS-auto421461auto421461Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t001130.1 ID=Tc09v2_t001130.1|Name=Tc09v2_t001130.1|organism=Theobroma cacao|type=mRNA|length=1596bp
ATGCGAAACCCCTCCGCGGTTACCCAAGAATCGAGCCCTGCTTTCGATCT
CGTGACTCAATTCGGTCACTTAGCATTCAACAAGAGTTTTTATAGCTCAA
ATTCAGATGGGTTCTATTCGTTTAAGCCAAATTACATGTATTTTTCGGGG
TTCGGAGGTTCAGTTTCTCAGAGAAGGCGTAGAGTTACAGCTGCTGCTTC
ACTCAGTTTGGGTGCTCGGAACAGCGTTTCTTCGAGTGTTAGGAGAATCG
TGAATGAGTTCAATAGAGTGATTAAATTTCACTGCGATAGAATCCCGATT
GGGTTCGCTTCGGTTCGGGTTGGTTCTGAGGATAGCAACGGGTTGAGAGT
AGATGGTGGTGGTGGTGTTTTGGAGGTTGAAGGTTTGCCTTTGAATGGAG
TTGGAGCTGAGACCCCCAAGAAAGTTTTGATTTTGATGAGTGATACTGGT
GGGGGTCATAGAGCCTCCGCTGAAGCTATTAAGGCTGCCTTTTATGAGGA
ATTTGGAGACGATTATCAGGTATTTGTTACGGATTTGTGGTCTGAACATA
CGCCCTGGCCATTTAATCAATTACCCAAGAGCTATAACTTCTTGGTGAAA
CATGGATCATTGTGGAAAATGACGTATTATGGAACTGCTCCACGGGTGGT
TCATCAGTCTAATTTTGCTGCAACTTCAACATTCATTGCTAGAGAGGTTG
CCAAAGGGTTGATGAAATACCAGCCAGACATTATTATCAGCGTACATCCA
CTGATGCAACATGTTCCACTTCGTATTCTGAGGGCAAAGGGTCTACTAAA
GAAGATAGTCTTTACCACAGTGGTCACAGACTTAAGCACCTGTCATCCTA
CATGGTTTCATAAGCTTGTAACAAGATGCTATTGCCCAACAGCAGAAGTA
GCAAAAAGGGCATTAAAAGCTGGACTTCAACCATCCCAAATTAAGGTTTA
TGGCCTTCCAGTGCGACCTTCTTTTGTGAAGCCTGTCCGGCCAAAGATTG
AGCTGAGGAGAGAATTAGGAATGGATGAGGATCTTCCTGCTGTTTTGCTC
ATGGGAGGAGGGGAAGGAATGGGGCCCATTGAGGCTACTGCTCGTGCACT
TGGAAATGCATTATATGATGAGAACCTTGGGGAGCCACTAGGTCAAATCC
TTGTGATTTGTGGCCGCAACAAAAAGCTTGCCAGCAAATTGCTTTCAATT
GATTGGAAAATTCCTGTCCAGGTCAAGGGATTTGTCACTAAAATGGAGGA
ATGCATGGGTGCTTGCGACTGCATTATTACAAAGGCGGGCCCAGGGACTA
TTGCTGAGGCTATGATACGAGGTCTTCCTATAATTTTGAATGACTACATT
GCTGGGCAGGAGGTTGGAAATGTTCCTTATGTGGTGGAAAATGGATGTGG
GAAATTTTCCAAGTCACCAAAAGAGATAGCTAATATTGTTGCCCAGTGGT
TTGGACCCAAAGCAGATGAACTCAAGGCCATGTCACAAAATGCTTTGAAG
TTGGCAAGGCCTGAGGCTGTGTTCAAGATTGTCCATGATCTTCATGAGCT
TGTTAGACAGAGAAATTTTGTACCCCAATTTTCCTGTACAACATAA
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protein sequence of Tc09v2_p001130.1

>Tc09v2_p001130.1 ID=Tc09v2_p001130.1|Name=Tc09v2_p001130.1|organism=Theobroma cacao|type=polypeptide|length=532bp
MRNPSAVTQESSPAFDLVTQFGHLAFNKSFYSSNSDGFYSFKPNYMYFSG
FGGSVSQRRRRVTAAASLSLGARNSVSSSVRRIVNEFNRVIKFHCDRIPI
GFASVRVGSEDSNGLRVDGGGGVLEVEGLPLNGVGAETPKKVLILMSDTG
GGHRASAEAIKAAFYEEFGDDYQVFVTDLWSEHTPWPFNQLPKSYNFLVK
HGSLWKMTYYGTAPRVVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHP
LMQHVPLRILRAKGLLKKIVFTTVVTDLSTCHPTWFHKLVTRCYCPTAEV
AKRALKAGLQPSQIKVYGLPVRPSFVKPVRPKIELRRELGMDEDLPAVLL
MGGGEGMGPIEATARALGNALYDENLGEPLGQILVICGRNKKLASKLLSI
DWKIPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYI
AGQEVGNVPYVVENGCGKFSKSPKEIANIVAQWFGPKADELKAMSQNALK
LARPEAVFKIVHDLHELVRQRNFVPQFSCTT*
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