Tc09v2_t000590.1

Overview
NameTc09v2_t000590.1
Unique NameTc09v2_t000590.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length975
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Productperoxidase 16
NotePeroxidase 45
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587622
GenbankXM_007011532.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g000590Tc09v2_g000590Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p000590.1Tc09v2_p000590.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto420530auto420530Theobroma cacaoexon
exon-auto420531auto420531Theobroma cacaoexon
exon-auto420532auto420532Theobroma cacaoexon
exon-auto420533auto420533Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto420534auto420534Theobroma cacaoCDS
CDS-auto420535auto420535Theobroma cacaoCDS
CDS-auto420536auto420536Theobroma cacaoCDS
CDS-auto420537auto420537Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t000590.1 ID=Tc09v2_t000590.1|Name=Tc09v2_t000590.1|organism=Theobroma cacao|type=mRNA|length=975bp
ATGGATTCTCTAAGACCCTTTTTTCCAATTTTCCTCTTCTTCCTCCTTAC
TCCAAGCCATGCTCGACTTCGAGTTGATTATTATCAGAACTCTTGCCCTC
ATGCTGAATCAATCGTCAGGTCTGCCGTTACACACAAGTTCCAGCAGACA
TTCGTTACAGCTCCAGCAACTCTTAGACTATTCTTCCATGATTGTTTCGT
CCGGGGCTGTGATGCTTCAGTGATGCTAGCTTCATGGAACAACACGGCAG
AGAAGGATAATCCGGATAATCTTTCCTTAGCTGGGGATGGATTTGACACT
GTGATCAAAGCCAAGGCCGCTGTTGACAGTGTGCCTGAGTGCAGAAACAA
AGTTTCATGTGCTGACATCTTAGCCATGGCTACGAGGGACGTCATAGCTT
TGACAGGAGGCCCATCTTATGCAGTAGAATTGGGAAGACTTGATGGTAGG
ATCTCTAGGAAAGCCAGCGTGCGGCATCATCTCCCTGGTCCGGATTTCAA
ATTAGACAAGCTCAAGGCCATGTTCGCCCCTCATGGTCTCACTGTCACGG
ATCTGGTTGCCCTGTCAGGAGCACATACAATCGGGTTCTCACACTGCAGC
CGGTTCTCCAGACGACTTTACAACTTCAAAAGCAAGAGCAGAATTGATCC
TACGCTTAATCTAGAATACGCAAGGCTGCTCAGGCAAATGTGCCCGAGAA
ATGTAGACCCCAGGGTGGCCATTGAGATGGACCCAGGCACGCCCGGAACG
TTCGATAATATGTACTACAAGAACCTTCAACAAGGGAAGGGACTTTTCAC
CTCTGATCAGGCTTTGTTCACTGATGCAATGTCGAGGAATATTGTCAACG
TTTTTGCTTCCAACAACACGGCCTTTGAAGAGGCTTTTGTTGCTGCGATA
ACCAAGCTTGGAAGGGTAGGGGTCAGGACGGGCAAACAGGGTGAGATCAG
GCATGATTGCGCTCTTGTGAACTAG
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protein sequence of Tc09v2_p000590.1

>Tc09v2_p000590.1 ID=Tc09v2_p000590.1|Name=Tc09v2_p000590.1|organism=Theobroma cacao|type=polypeptide|length=325bp
MDSLRPFFPIFLFFLLTPSHARLRVDYYQNSCPHAESIVRSAVTHKFQQT
FVTAPATLRLFFHDCFVRGCDASVMLASWNNTAEKDNPDNLSLAGDGFDT
VIKAKAAVDSVPECRNKVSCADILAMATRDVIALTGGPSYAVELGRLDGR
ISRKASVRHHLPGPDFKLDKLKAMFAPHGLTVTDLVALSGAHTIGFSHCS
RFSRRLYNFKSKSRIDPTLNLEYARLLRQMCPRNVDPRVAIEMDPGTPGT
FDNMYYKNLQQGKGLFTSDQALFTDAMSRNIVNVFASNNTAFEEAFVAAI
TKLGRVGVRTGKQGEIRHDCALVN*
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