|
Properties
Property Name | Value |
Note | Putative Elongation factor 1-alpha |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns |
Product | HBS1-like protein, transcript variant X3 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t000530.3 ID=Tc09v2_t000530.3|Name=Tc09v2_t000530.3|organism=Theobroma cacao|type=mRNA|length=2115bp ATGCCTCGGAAAGTTAACTATGGGGTTGATTACGATGATGATGATGATTA TGATGACTATGATGAATATGACTATGGCTATGAAGTAGAAGAAAACGTGG AAGCACCTTCTGAGGAAGAAACTATCAATCATGGTGTGTGGCGTTGCTCC ATTTGTACTTACGATAATGATGCAACCTTGTCAGCATGTGATATTTGTGG GGTTCTTCGCAGTCCTTTGGTCAACAACTCCACCTATGATGGGAAGAAAA CAGCCCCTTTCAAGTTTGATGTTCCATCTCCAGATGATGTGGTTTCCAAT GGACTGCGTTCCTCCAAATTGGGTTCGAAAGCCAACATTTTTGACTCAAA ATCTTCCAAAGTTTCCTCAAGTGTGGTCGGGAAGAATGAGGCAGCTAAAG TACAATTAAGTACTAAAAGGTCAGGTAGTTCATATGACTCAACAGCAAAA GACAAGCACAATAGACTGGATGAGATAATTTCTTCGAAGAATCTAGAAGT TGATGCATTGTCAAGTTCCAGAAACTCAGATAACTCCTCTGCATCAATGC CAAAAGGCAGGATTGATATTGTGGATGAAAGCATTGTTGTGGATAATCTG CGATCTAGCGTTAAAAGGTCATCATTGATGCCAAAAGAAATACATAATAT GGTGGATGATAGCAGCTCTTCAAGGAATGGAGGTGAGGCACATAGTCTCA CCAGTAATGTGAAAAACATGTCTTTGGCTGCTAAATCCGGGCACTCAAAG GATACAAGTGCTGGAAGAGCAAATTCATATGCTCAGTATAAACCAGAAGA GTGGATGCTCCCTGAAAAAGCAGAAGATTCACTGACTCAACTGAATCTTG CAATTGTTGGGCATGTTGATTCCGGAAAATCAACACTCTCTGGTAGACTG CTTCACCTTTTGGGACGAATATCCCAAAAAGAAATGCACAAATATGAAAA GGAGTCAAAATTGCAGGGCAAAGGATCCTTTGCTTATGCTTGGGCGTTGG ATGAGAGTGCTGAAGAAAGGGAAAGGGGAATCACTATGACTGTGGCTGTG GCTTATTTTGATTCAAAAAGATATCATGTTGTTGTCCTTGATTCCCCAGG GCACAAAGATTTTGTTCCAAACATGATAACTGGAGCAACACAAGCTGATG CTGCAATTCTTGTCGTAGATGCTTCTATTGGTTCATTTGAAGCTGGTATG GACGGCGCAAAAGGACAGACAAGGGAGCATGCACAACTCATCAGAAGTTT TGGTGTTGATCAAATTATAGTTGCAGTTAACAAGATGGATACTGTAGAGT ATTCTAAGAATCGATTTGACTTTTTAAAATCACAGCTTTGGACATTTCTC CGCTCTTGTGGTTTCAAGGATTCCTCTGTTTCATGGATTCCACTGAGTGT TGTAGAAAATCAGAATTTAGTGGCTGCACCTTCTGACGTTCGTTTATCGT GGTATCATGGACCTTATCTATTAGATGCAATTGATTCCTTCCAACCTCCT ACAAGAGATTTTTCAAAGCCTCTACTTATTCCTATATGTGATGTTATAAG ATCACCTTCACAGGGGCAGGTGTCTGCTTGTGGCAAGTTGGAGGCTGGAG CTGTTCGAAGTGGATCAAAGGTTTTAGTCATGCCATCTGCAAATATAGCA ACGGTGCGTTCCTTAGAACGTGGTTCCCAGGCTTGTACAATTGCAAGAGC TGGGGACAATGTAGCTGTCAACCTACATGGAATAGATGGAAATCTCGTGT TGGCTGGTGGAGTGTTATGTCACCCTGATTTTCCAGTTGCAATAGCAAAA CATTTGGAGTTGAAGGTGCTTGTCTTGGATGGTGCAACCCCAATTTTAAT CGGTTCTCAGTTGGAGTTTCATATACACCATGCAAAGGAGGCTGCAAGAG TTGCAAAAATATCATCATTACTTGATTCAAAGACTGGGAAAGTCACAAAG AAAGCACCCCGCTGCATTGTTGCTAAGCAGAGTGCAGTAGTTGAGGTGAT ATTGCATGAACCGGTTTGCGCGGAAGAGTTTTCAAAATGCAAAGCCCTTG GAAGAGTGTTTCTTAGAACATTAGGAAGAACGGTTGCTGTGGGCATCGTG ACTCGAATAGTTTAG back to topprotein sequence of Tc09v2_p000530.3 >Tc09v2_p000530.3 ID=Tc09v2_p000530.3|Name=Tc09v2_p000530.3|organism=Theobroma cacao|type=polypeptide|length=705bp
MPRKVNYGVDYDDDDDYDDYDEYDYGYEVEENVEAPSEEETINHGVWRCS ICTYDNDATLSACDICGVLRSPLVNNSTYDGKKTAPFKFDVPSPDDVVSN GLRSSKLGSKANIFDSKSSKVSSSVVGKNEAAKVQLSTKRSGSSYDSTAK DKHNRLDEIISSKNLEVDALSSSRNSDNSSASMPKGRIDIVDESIVVDNL RSSVKRSSLMPKEIHNMVDDSSSSRNGGEAHSLTSNVKNMSLAAKSGHSK DTSAGRANSYAQYKPEEWMLPEKAEDSLTQLNLAIVGHVDSGKSTLSGRL LHLLGRISQKEMHKYEKESKLQGKGSFAYAWALDESAEERERGITMTVAV AYFDSKRYHVVVLDSPGHKDFVPNMITGATQADAAILVVDASIGSFEAGM DGAKGQTREHAQLIRSFGVDQIIVAVNKMDTVEYSKNRFDFLKSQLWTFL RSCGFKDSSVSWIPLSVVENQNLVAAPSDVRLSWYHGPYLLDAIDSFQPP TRDFSKPLLIPICDVIRSPSQGQVSACGKLEAGAVRSGSKVLVMPSANIA TVRSLERGSQACTIARAGDNVAVNLHGIDGNLVLAGGVLCHPDFPVAIAK HLELKVLVLDGATPILIGSQLEFHIHHAKEAARVAKISSLLDSKTGKVTK KAPRCIVAKQSAVVEVILHEPVCAEEFSKCKALGRVFLRTLGRTVAVGIV TRIV* back to top
|