Tc08v2_t014330.2

Overview
NameTc08v2_t014330.2
Unique NameTc08v2_t014330.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2787
Properties
Property NameValue
NoteNon-lysosomal glucosylceramidase
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productnon-lysosomal glucosylceramidase, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592889
GenbankXM_018126059.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g014330Tc08v2_g014330Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p014330.2Tc08v2_p014330.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto413958auto413958Theobroma cacaoexon
exon-auto413959auto413959Theobroma cacaoexon
exon-auto413960auto413960Theobroma cacaoexon
exon-auto413961auto413961Theobroma cacaoexon
exon-auto413962auto413962Theobroma cacaoexon
exon-auto413963auto413963Theobroma cacaoexon
exon-auto413964auto413964Theobroma cacaoexon
exon-auto413965auto413965Theobroma cacaoexon
exon-auto413966auto413966Theobroma cacaoexon
exon-auto413967auto413967Theobroma cacaoexon
exon-auto413968auto413968Theobroma cacaoexon
exon-auto413969auto413969Theobroma cacaoexon
exon-auto413970auto413970Theobroma cacaoexon
exon-auto413971auto413971Theobroma cacaoexon
exon-auto413972auto413972Theobroma cacaoexon
exon-auto413973auto413973Theobroma cacaoexon
exon-auto413974auto413974Theobroma cacaoexon
exon-auto413975auto413975Theobroma cacaoexon
exon-auto413976auto413976Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto413977auto413977Theobroma cacaoCDS
CDS-auto413978auto413978Theobroma cacaoCDS
CDS-auto413979auto413979Theobroma cacaoCDS
CDS-auto413980auto413980Theobroma cacaoCDS
CDS-auto413981auto413981Theobroma cacaoCDS
CDS-auto413982auto413982Theobroma cacaoCDS
CDS-auto413983auto413983Theobroma cacaoCDS
CDS-auto413984auto413984Theobroma cacaoCDS
CDS-auto413985auto413985Theobroma cacaoCDS
CDS-auto413986auto413986Theobroma cacaoCDS
CDS-auto413987auto413987Theobroma cacaoCDS
CDS-auto413988auto413988Theobroma cacaoCDS
CDS-auto413989auto413989Theobroma cacaoCDS
CDS-auto413990auto413990Theobroma cacaoCDS
CDS-auto413991auto413991Theobroma cacaoCDS
CDS-auto413992auto413992Theobroma cacaoCDS
CDS-auto413993auto413993Theobroma cacaoCDS
CDS-auto413994auto413994Theobroma cacaoCDS
CDS-auto413995auto413995Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t014330.2 ID=Tc08v2_t014330.2|Name=Tc08v2_t014330.2|organism=Theobroma cacao|type=mRNA|length=2787bp
ATGGCTGATTCGGGGAAACCTCCTTCCCTCACATGGCAACGGCAATTGAA
TAGCATTCGAAAACCCCCTACTGCTTTTGGCCTAGGTTTCAATGAGATAA
TTCATATGGCACAAATAGGTTTTCGGCTGTGGCGTTACACCAAAGAAGAA
GAAGCAAAAGGAAGAGCATCTATATTTGATATTTTCAGAAAGCACCTTGT
TACATCTGATCATGGCGTTCCTTTAGGTGGTATAGGGGCAGGAAGCATTG
GAAGAGGTTACAGAGGTGAATTTCAACGCTTTAAACTATTTCCCAAAGTA
TGTGAAGAGGGTCCAATCTTGGCAAATCAGTTCTCTGCTATTGTATCACG
TCCAAATGGAAACAAATGTTCAACTGTACTATGTGCAAGAAGTCCAGAGG
TGCCAAAAGAAAGTACAGGTCTGGGCATTGAATCTTGGGATTGGAACTTG
AAAGGGGAGAAGTGTACATACCATGCTTTGTTTCCAAGGTCATGGACTAT
TTATGAGGGTCAACCTGATCCAGAGCTTAGAATCAGTTGTTGTCAAATTT
CACCTTTTATTCCTCACAATTACAAAGAGAGCAGTTTTCCTGTATCAGTG
TTTACGTTCACGCTCTCTAATACTGGAAGTACCTCTGCTGATGTCACCTT
GCTTTTTACATGGACTAATTCGGTGGGAGGGAACTCTGGATTTTCTGGTG
ATCACTTCAACTTAAAGATGAAGACAGAAGATGGAGTTCGTGGAGTACTT
CTACACCACAAAACAGCCAATGGGAAACCTCCACTTACTTTTGCCATTGC
AGCAAAGGAAACTAGTGAAGTACATGTCTCAGAGTGCCCTTGCTTCTTGA
TATCTGGAAATTTTCAAGGCATGAGTGCCAAAGATATGTGGCATGAAATT
AAAAAGCATGGGTCATTTGACAACCTTGATTATGAAGAATCTTCACCTTC
AGAACCAGGATCATCCATTGGAGCAGCTGTTGCAGCCTCTGTGACTGTTC
CTTCTGATTCTGTTCGTAGAGTCACATTCTCACTTGCATGGGACTGTCCA
GAAGTAAGATTTGATGACAAGACATACCACAAGCGCTATACGAAATATTA
TGGCACTTTAGGGGATGCAGCAGCAAATATTGCACATGATTCTATTTTTG
AGCATTCTAACTGGGAATCCCAGATAGAATCATGGCAAAGACCAATTCTT
GAAGACAAAAGGCTTCCAGACTGGTATCCTGTCATTCTCTTCAATGAGCT
CTACTACCTTAATGCAGGGGGGACAATATGGACAGATGGATCACCTCCAA
TGCAAAGTTTAGTATCCATCGGAAAGAAGAAGTTTTCTCTTGACAAGTCC
AGATCACATTTGGATAATACAATTGACACTGCTAATCAAGATGGTATAGC
TATTGACATCCTAGAGAGGATGACATCTGTACTCGAGAAAGCACATATTC
CTCTAATGTCAAATGCTGCTTTTGGAACCCGTTTGCTCCAGGATGGAGAA
GAAAACATTGGTCAGTTCCTCTACCTTGAAGGGAGTGAGTACCTCATGTG
GAACACTTATGATGTTCATTTCTACTCCTCCTTTGCACTACTCATGCTAT
TCCCAAAACTTGAACTGAGCATCCAGAGAGACTTTGCAGCAGCAGTTATG
ATACATGATCCAAGCAAGATGGAAATTATGAGTGATGGGAAATGGGTTCC
AAGAAAGGTTCTTGGTGCTGTTCCACATGATATTGGGCTTAATGACCCTT
GGTTTGAAGTAAATGCTTATAATCTATTTAATACAGATAATTGGAAAGAC
CTGAATTCTAAGTTTGTTCTCCAAATCTATAGGGATATTGTTGCTACTGG
AGACAAAAATTTTGCACAGGCTGTTTGGCCTTCAGTTTATACTGCAATGG
CTTTTATGGAACAATTTGATAGTGATGGAGATGGGATGATTGAGAATCAA
GGTTTCCCAGATCAAACATATGATGCATGGTCTGTTACTGGTGTGAGTGC
TTATAGTGGGGGGCTCTGGGTGGCAGCCCTCCAAGCTGCTTCATCTATTG
CTTGCCAAGTAGGTGATGATGTGTCTGCTGCCTACTTTCATGTGAAGTAT
CAAAAGGCAAAATCTGTATATGGCACCTTGTGGAATGGCTCCTACTTCAA
CTATGACAACACATGGAGTAGTTCCAGCAGATGTATTCTAGCTGATCAAC
TGGCTGGACAATGGTATGCTAGAGCAAGTGGTCTCATGCCAATTGCAGAT
GATGACAAAGTGAGAAGTGCACTTCAAACGATATATGATTTCAATGTCTT
AAAGGTGAAAGGAGGAACACGTGGTGCCGTAAATGGGATGCTTCCAGATG
GAAGAGTTGATATGTCAGCACTACAATCAAGGGAAGTTTGGGCTGGAGTT
ACATATGCTGTTGCTGCTACTATGATTCAAGAGGGGATGGTCGAAACAGC
ATTTAAAACAGCAGCCGGTGCGTATGAAGCTGCTTGGTCACAGCAAGGTC
TCGGGTACTCTTTTCAGACCCCAGAAGCCTGGAACACAGATGAGCAGTTC
AGATCCCTCTGTTACATGAGACCTTTAGCAGTATGGGCAATGCAATGGGC
TTTGACAAAGCCAAAACTCTTCACAGAGGAGATGAAACATGGAGTGATTA
ATGACTTTTTATACCATAAGCAGCATCTAGGATATTCAAAAGTGGCTCAC
CTCTTAAAGCTGCCTAGTAAGGAGGAAACCTCTAAAACCTTCCTACAGTC
TGTCACTGAGTTCATTTGCAGAAGAGTACCAATTTGA
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protein sequence of Tc08v2_p014330.2

>Tc08v2_p014330.2 ID=Tc08v2_p014330.2|Name=Tc08v2_p014330.2|organism=Theobroma cacao|type=polypeptide|length=929bp
MADSGKPPSLTWQRQLNSIRKPPTAFGLGFNEIIHMAQIGFRLWRYTKEE
EAKGRASIFDIFRKHLVTSDHGVPLGGIGAGSIGRGYRGEFQRFKLFPKV
CEEGPILANQFSAIVSRPNGNKCSTVLCARSPEVPKESTGLGIESWDWNL
KGEKCTYHALFPRSWTIYEGQPDPELRISCCQISPFIPHNYKESSFPVSV
FTFTLSNTGSTSADVTLLFTWTNSVGGNSGFSGDHFNLKMKTEDGVRGVL
LHHKTANGKPPLTFAIAAKETSEVHVSECPCFLISGNFQGMSAKDMWHEI
KKHGSFDNLDYEESSPSEPGSSIGAAVAASVTVPSDSVRRVTFSLAWDCP
EVRFDDKTYHKRYTKYYGTLGDAAANIAHDSIFEHSNWESQIESWQRPIL
EDKRLPDWYPVILFNELYYLNAGGTIWTDGSPPMQSLVSIGKKKFSLDKS
RSHLDNTIDTANQDGIAIDILERMTSVLEKAHIPLMSNAAFGTRLLQDGE
ENIGQFLYLEGSEYLMWNTYDVHFYSSFALLMLFPKLELSIQRDFAAAVM
IHDPSKMEIMSDGKWVPRKVLGAVPHDIGLNDPWFEVNAYNLFNTDNWKD
LNSKFVLQIYRDIVATGDKNFAQAVWPSVYTAMAFMEQFDSDGDGMIENQ
GFPDQTYDAWSVTGVSAYSGGLWVAALQAASSIACQVGDDVSAAYFHVKY
QKAKSVYGTLWNGSYFNYDNTWSSSSRCILADQLAGQWYARASGLMPIAD
DDKVRSALQTIYDFNVLKVKGGTRGAVNGMLPDGRVDMSALQSREVWAGV
TYAVAATMIQEGMVETAFKTAAGAYEAAWSQQGLGYSFQTPEAWNTDEQF
RSLCYMRPLAVWAMQWALTKPKLFTEEMKHGVINDFLYHKQHLGYSKVAH
LLKLPSKEETSKTFLQSVTEFICRRVPI*
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