Tc08v2_t013990.1

Overview
NameTc08v2_t013990.1
Unique NameTc08v2_t013990.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1020
Properties
Property NameValue
NoteArginase 1, mitochondrial
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productarginase 1, mitochondrial
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592854
GenbankXM_018125288.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g013990Tc08v2_g013990Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p013990.1Tc08v2_p013990.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto413425auto413425Theobroma cacaoexon
exon-auto413426auto413426Theobroma cacaoexon
exon-auto413427auto413427Theobroma cacaoexon
exon-auto413428auto413428Theobroma cacaoexon
exon-auto413429auto413429Theobroma cacaoexon
exon-auto413430auto413430Theobroma cacaoexon
exon-auto413431auto413431Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto413432auto413432Theobroma cacaoCDS
CDS-auto413433auto413433Theobroma cacaoCDS
CDS-auto413434auto413434Theobroma cacaoCDS
CDS-auto413435auto413435Theobroma cacaoCDS
CDS-auto413436auto413436Theobroma cacaoCDS
CDS-auto413437auto413437Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t013990.1 ID=Tc08v2_t013990.1|Name=Tc08v2_t013990.1|organism=Theobroma cacao|type=mRNA|length=1020bp
ATGTCAGCCATAGGGCGGAGCAGAGGAATTCATTATTTGCAGAAACTGAA
AGCTGCAAATATACCTTCTGATTTGATCGAAAAGGGCCAGCATCGTGTAA
TAGATGCTTCTCTCACCCTTATTCGCGAGAGGGCAAAGCTCAAGGGTGAG
CTTGTGCGTGCTTTAGGAGGTTCTTTAGCATCCACTTCTCTGCTTGGAGT
TCCTTTAGGACACAACTCATCGTTTCTTCAAGGACCCGCGTTTGCTCCTC
CTCGAATTAGGGAGGCAATCTGGTGTGGTAGCACGAACTCAACCACTGAA
GAAGGGAAGCAACTAAATGATCCTCGGGTGCTAACTGATGTTGGTGATGT
CCCTGTCCAGGAGATCCGTGATTGTGGTGTAGATGATGATAGATTGATGA
ACGTCATAAGTGAGTCTGTCAAGTTAGTAATGGAGGAGGATCCATTACGC
CCATTAGTTTTAGGTGGTGACCACTCCATATCTTTTCCTGTTGTAAGAGC
TGTCTCTGAGAAGCTTGGTGGACCTGTGGATATACTTCATTTAGATGCCC
ATCCTGATATTTATGATGCCTTTGAAGGGAATAAGTATTCGCATGCATCT
TCTTTTGCTCGAATTATGGAGGGTGGTTATGTTAGACGGCTTTTGCAGGT
TGGTATCAGATCAATAACAACTGAGGGGCGCGAACAAGGCAAAAGGTTTG
GAGTGGAGCAATATGAAATGCGAACATTTTCAAGAGACCGTCATTTCTTG
GAAAACCTGAAACTGGGGGAAGGAGTAAAGGGTGTGTATATTTCAGTCGA
TGTGGACTGTCTTGATCCCGCCTTTGCTCCAGGGGTATCTCACATTGAAC
CAGGAGGTCTTTCCTTTCGTGATGTTCTCAACATCCTACACAACCTCCAA
GGCAATCTCGTTGCTGCAGATGTGGTAGAATTCAACCCGCAACGTGACAC
TGTTGATGGGATGACTGCAATGGTTGCAGCTAAGCTTGTAAGAGAACTGA
CGGCTAAGATGTCAAAATGA
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protein sequence of Tc08v2_p013990.1

>Tc08v2_p013990.1 ID=Tc08v2_p013990.1|Name=Tc08v2_p013990.1|organism=Theobroma cacao|type=polypeptide|length=340bp
MSAIGRSRGIHYLQKLKAANIPSDLIEKGQHRVIDASLTLIRERAKLKGE
LVRALGGSLASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTE
EGKQLNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVISESVKLVMEEDPLR
PLVLGGDHSISFPVVRAVSEKLGGPVDILHLDAHPDIYDAFEGNKYSHAS
SFARIMEGGYVRRLLQVGIRSITTEGREQGKRFGVEQYEMRTFSRDRHFL
ENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQ
GNLVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKMSK*
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