Tc08v2_t013650.3

Overview
NameTc08v2_t013650.3
Unique NameTc08v2_t013650.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length618
Properties
Property NameValue
NoteRas-related protein Rab7
Model evidenceSupporting evidence includes similarity to: 1 EST, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productras-related protein Rab7, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592748
GenbankXM_007019616.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g013650Tc08v2_g013650Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p013650.3Tc08v2_p013650.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto412630auto412630Theobroma cacaoexon
exon-auto412631auto412631Theobroma cacaoexon
exon-auto412632auto412632Theobroma cacaoexon
exon-auto412633auto412633Theobroma cacaoexon
exon-auto412634auto412634Theobroma cacaoexon
exon-auto412635auto412635Theobroma cacaoexon
exon-auto412636auto412636Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto412637auto412637Theobroma cacaoCDS
CDS-auto412638auto412638Theobroma cacaoCDS
CDS-auto412639auto412639Theobroma cacaoCDS
CDS-auto412640auto412640Theobroma cacaoCDS
CDS-auto412641auto412641Theobroma cacaoCDS
CDS-auto412642auto412642Theobroma cacaoCDS
CDS-auto412643auto412643Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t013650.3 ID=Tc08v2_t013650.3|Name=Tc08v2_t013650.3|organism=Theobroma cacao|type=mRNA|length=618bp
ATGTCAGTGCGAAGACGAACCTTGCTCAAGGTCATTGTTCTCGGCGATAG
CGGAGTGGGCAAGACGTCGTTGATGAATCAATATGTTCATAAGAAGTTTA
GTCAGCAATATAAAGCAACAATTGGTGCTGATTTTGTCACTAAGGAAGTC
CAGATTGACGACCGCCTTGTCACTCTGCAAATATGGGATACTGCAGGCCA
GGAGCGGTTTCAGAGTCTTGGAGTTGCCTTCTATAGGGGTGCAGATTGCT
GTGTCCTAGTTTATGATGTTAATGTGATGAAGTCATTTGATACCCTTGAT
AATTGGCATGAGGAGTTTCTTAAACAGGCAAATCCAACTGACCCCAGGAC
GTTTCCATTTATATTGCTTGGAAACAAGATAGATATAGATGGTGGTAATA
GCCGAGTGGTCTCTGATAAGAAAGCAAATGAATGGTGTGCTTCAAAAGGA
AAGATTCCTTACTTTGAAACATCAGCAAAAGAAGATATCAATGTTGATCA
TGCATTTCTTTGTATTGCCAAAACTGCTCTGGCAAATGAGCGTGAGCAGG
ACATCTATTTCCAGGGCATCCCGGAGGCTGTGTCTGAGACTGAGCAAAGA
AATGGTTGTGCATGCTGA
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protein sequence of Tc08v2_p013650.3

>Tc08v2_p013650.3 ID=Tc08v2_p013650.3|Name=Tc08v2_p013650.3|organism=Theobroma cacao|type=polypeptide|length=206bp
MSVRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEV
QIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLD
NWHEEFLKQANPTDPRTFPFILLGNKIDIDGGNSRVVSDKKANEWCASKG
KIPYFETSAKEDINVDHAFLCIAKTALANEREQDIYFQGIPEAVSETEQR
NGCAC*
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