Tc08v2_t012140.1

Overview
NameTc08v2_t012140.1
Unique NameTc08v2_t012140.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1008
Properties
Property NameValue
NotePeroxidase 43
Model evidenceSupporting evidence includes similarity to: 12 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productperoxidase 13
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592526
GenbankXM_007019313.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g012140Tc08v2_g012140Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p012140.1Tc08v2_p012140.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto409803auto409803Theobroma cacaoexon
exon-auto409804auto409804Theobroma cacaoexon
exon-auto409805auto409805Theobroma cacaoexon
exon-auto409806auto409806Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto409807auto409807Theobroma cacaoCDS
CDS-auto409808auto409808Theobroma cacaoCDS
CDS-auto409809auto409809Theobroma cacaoCDS
CDS-auto409810auto409810Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t012140.1 ID=Tc08v2_t012140.1|Name=Tc08v2_t012140.1|organism=Theobroma cacao|type=mRNA|length=1008bp
ATGACATTTCTGACTTCCAAAATGCACAAACACACTCTAGTTGCCCTGAT
TTGGGCTTTGCTTATTCTTCCTAACATTTTAGGTGTTTCCCAAGGGCAAC
TAGGAGTTGGCTTCTACTCAAAAACATGTCCCACTGCTGAATCTATCATC
CACAAAGTTGTTCAGAAAGCAGTGGCTGACAGTCTTAGGAATGCTGCATT
ATTGCTAAGGCTTCAGTTCCATGACTGCTTTGTTGAAGGCTGTGATGGGT
CGATTCTGATAAAAAATGTTGCGGATGGTGAGTTAAAAGCACGAGGAAAC
TTGGGAGTGCAAGGTTTTGACATCATAGAGAGCGCCAAAGCACGGTTGGA
AAATCTGTGCCCTGGAGTTGTTTCTTGCGCAGACATCGTGGCTTTAGCTG
CGAGAGATGCTGTATCCTTGGTTAAGGGGCCATTTTATGATGTTCCAACC
GGCCGCAGAGATGGACGGCTCTCAAGGATGTCCCTGGCTGAAAACTTGCC
TGATGTTGATGATTCAATCCATGTTCTCAAATCCAAATTTAGGGCAAAGG
GTCTTTCTGATAAAGACCTTGTTCTTTTAAGTGGTGGTGCGCATACAATT
GGGCTTACAGCCTGTTTCTTCATGCAACATAGACTCTACAACTTCACCCC
AGGGGGAGGCTCTGATCCAGCAATTAACCCTCGCTTCCTACCACAGCTCA
AAGCTCATTGCCCCTTAAATGGAGATGTCAATGTCCGAATACCTCTTGAT
TGGGCGACTCAAAATGTATTCGATGTCCATATCCTGCGCAATATCAGAGA
TGGAACCGCTGTGATAGCATCCGATGCTAGGCTCTACGATGACAGAGAGA
CCAGGCAAATACTTGACTCTTATATCAGCTCTAATGGTTCTGGAACAAGG
CCATCTTTTAATGCGGATTTTGCTAAAGCAATGGTGAAGATGGGAAACAT
TGGGGTGAAAACTGGCTCACAAGGAGAGATTCGGCGAGTTTGCAGTGCTG
TTAATTGA
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protein sequence of Tc08v2_p012140.1

>Tc08v2_p012140.1 ID=Tc08v2_p012140.1|Name=Tc08v2_p012140.1|organism=Theobroma cacao|type=polypeptide|length=336bp
MTFLTSKMHKHTLVALIWALLILPNILGVSQGQLGVGFYSKTCPTAESII
HKVVQKAVADSLRNAALLLRLQFHDCFVEGCDGSILIKNVADGELKARGN
LGVQGFDIIESAKARLENLCPGVVSCADIVALAARDAVSLVKGPFYDVPT
GRRDGRLSRMSLAENLPDVDDSIHVLKSKFRAKGLSDKDLVLLSGGAHTI
GLTACFFMQHRLYNFTPGGGSDPAINPRFLPQLKAHCPLNGDVNVRIPLD
WATQNVFDVHILRNIRDGTAVIASDARLYDDRETRQILDSYISSNGSGTR
PSFNADFAKAMVKMGNIGVKTGSQGEIRRVCSAVN*
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