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Properties
| Property Name | Value |
|---|
| Note | Protein translocase subunit SECA2, chloroplastic |
| Model evidence | Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns |
| Product | protein translocase subunit SECA2, chloroplastic, transcript variant X1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc08v2_t011190.3 ID=Tc08v2_t011190.3|Name=Tc08v2_t011190.3|organism=Theobroma cacao|type=mRNA|length=3174bp
ATGGCCACTTTGCCTTCTCTTCTCAACGCTTCTTTCCTCACCCCAAAGCC
CCTCCCTCAACGTGAAACTCTCCTTTGTACAAAGCCCACCTCCTCTTTCC
TCTTCCCTTCCTCTTCTCCTTCTTTCTTCAGCCTTCGACGACAACATATT
AATATACAAACGCCTATAGCTGCATCTCTCAAGGAGGACGTGGGTCGTTT
TAAGAAGACTTTGGGTGATTTTATTAGCTTAAACTACTGGGTTGTTCGAG
ATTATTATCGTCTTGTCGACTTTGTTAATGCACTCGAGCCAGAGATTCAG
AGGCTATCTGATGAGCAGCTGACTGCTAAAACTTCTGAGTTTAAGAAAAG
GTTGAGTCAAGGGGATAATATTTCCGATATTCAAGCTGAGGCATTTGCTG
TTGTTCGGGAAGCTGCAAGAAGGAAGCTTGGCATGCGCCATTTTGATGTG
CAGATTATTGGTGGAGCGGTACTTCATGATGGGTCCATTGCTGAGATGAA
AACAGGGGAGGGAAAAACATTGGTTTCCACATTAGCTGCATATCTTAATG
CACTGACTGGTGATGGTGTCCATGTTGTAACTGTGAATGATTACCTTGCT
CAACGTGATGCTGAGTGGATGGGTCGAGTTCATCGCTTCTTAGGTCTTTC
AGTTGGGCTTATTCAGAAGGGGATGACAGCTGAAGAGAGGAGAATCAACT
ACCAATGTGATATAACATACACCAACAACTCAGAACTAGGCTTTGATTAT
CTTCGGGATAATCTTGCTGGAAATAGTGATCAACTTGTGATGAGATGGCC
AAAACCATTTCATTTTGCAATTGTTGATGAAGTTGATTCTGTTCTCATTG
ATGAAGGAAGAAATCCTTTGTTAATAAGTGGTGAGGCTAGTAAAGATGCT
GCACGTTATCCGGTTGCTGCTAAAGTGGCTGAGCTGCTAACGAGGGGTCT
GCATTATAATGTTGAGCTTAAAGATAATTCAGTGGAGTTGACTGAAGAAG
GAATTGCACTTGCTGAGTTGGCTCTTGAAACGAATGATCTGTGGGATGAA
AATGATCCCTGGGCAAGATTTGTGATGAATGCTTTGAAAGCTAAAGAATT
TTATCGGCGAGATGTCCAATACATTGTCAGAAATGGGAAAGCTCTCATTA
TCAATGAGCTGACAGGCAGAGTTGAGGAGAAACGGAGATGGTCTGAAGGG
ATTCACCAGGCTGTAGAAGCAAAAGAAGGTCTGAAGATTCAGGCTGATTC
AGTTGTTGTGGCTCAAATCACCTACCAATCACTATTTAAGCTCTATCCAA
AGCTTTCAGGGATGACTGGGACTGCAAAAACTGAAGAGAGGGAGTTCTTG
AAAATGTTCCAGATGCCCGTTATTGAAGTGCCCACTAATCTTCCAAATAT
TCGTAAAGATTTACCCATACAAGCTTTTGCTACTGCTCGAGGGAAATGGG
AGTATGTTAGTCAAGAAGTGGAATACATGTTTAGGCAGGGCCGTCCAGTT
TTAGTTGGGACCACTAGTGTTGAGAACTCTGAGTATCTGTCCGATCTGCT
GAAGGAGAGAAATATCCCTCACAATGTCCTGAATGCGAGACCCAAGTATG
CAGCAAGGGAAGCGGAAATTATTGCCCAAGCAGGCAGAAAGTATGCTATA
ACTATTTCTACCAATATGGCTGGCAGAGGAACTGACATTATTCTTGGGGG
TAATCCAAAAATGCTTGCAAGAGAAATTATAGAGGACAGCTTGCTTTCAT
TTCTGACAAGAGAAGCTCCTAATCTTGAAGCCGATGACATGGGAATTTCA
AAAAAGGTGTTGTCCAAGATAAAGGTTGGACCATCATCAATGGCTTTGTT
AGCTAAGGCTGCCTTAATGGCAAAATATGTTGGCAAAAGTGAGGGAAAGA
GCTGGACATATCAGGAGGCAAAATCTATCATTTCAGAGTCTGTGGAAATG
AGCCAGTCAATGCCTTTGAAAGAGCTGAGGAAGCTTATTGATGAACAGTC
TGAGATGTACCCTCTTGGCCCTTCTATAGCAATTACTTATTTGTCTGTTC
TCAAAGATTGTGAAGTACACTGCACCAAAGAAGGGTTTGAAGTGAAAAGG
CTTGGGGGGCTTCATGTGATCGGCACATCTTTGCATGAATCCCGTAGAAT
AGATAATCAGCTTCGTGGTAGAGCAGGAAGGCAAGGGGATCCTGGATCCA
CACGGTTTATGGTGAGCTTGCAAGATGAGATGTTTCAAAAGTTTAATTTT
GATACTGAGTGGGCTGTGAAGCTTATTTCAAAAATTACAAATGATGAAGA
TATACCTATTGAAGGTGATGCAATTGTAAAGCAGCTTTTGGCGCTTCAAA
TCAATGCAGAGAAGTACTTCTTTAACATAAGAAAGAGCCTGGTCGAGTTC
GATGAAGTTTTAGAGGTTCAAAGAAAGCATGTCTATGACCTCAGGCAATT
GATTTTGACGGGTGATAATGAAAGTTGTTCTCAACATATTTTTCAGTACA
TGCAAGCAGTGGTAGATGAAATTGTCTTTGGAAATGCTGATCCACTGCAG
CATCCAAGATACTGGAGTTTGGCTAAGCTTTTGAAAGAGTTCATTGCTAT
TGCAGGGAAGCTACTGGACGACTCATTTGCATCAATTACAGAGGAAGATT
TACTCCAATCTCTTAAACAGCTACATGAATCAAATTCTGTAGATATTGAC
AATCTTCACCTTCCAAACTTGCCTAAGCCTCCAGATTGCTTTAGAGGAAT
CCGCAGAAAAATTTCTTCATTGAAGCGCTGGCTTGCTATTTGCTCTGATG
ATTCAACAAAGAATGGAAGGTACCGGCCAACAACTAATATTCTCCGCAAA
TACCTTGGGGATATTTTGATTGCTTCATATTTGAACATCGTAGAAGAATC
TGGTTATGATGATGCTTACATAAAAGAAATTGAGAGAGCAGTTCTTGTCA
AGACTCTGGATTGTTTCTGGAGGGATCATCTTGTAAACATGAACAGGCTG
AGTTCTGCGGTAAATGTAAGAAGTTTTGGGCACAGAAATCCTCTTGAAGA
ATATAAAATTGATGGGTGTCGATTTTTTATCTCAATGCTCAGTGCAACGC
GAAGGTTAACTGTAGAATCACTCTTGCATTATTGGTCATCCCCTATGGAG
TCACAAGAGCTATTTTTATCATAA back to topprotein sequence of Tc08v2_p011190.3 >Tc08v2_p011190.3 ID=Tc08v2_p011190.3|Name=Tc08v2_p011190.3|organism=Theobroma cacao|type=polypeptide|length=1058bp
MATLPSLLNASFLTPKPLPQRETLLCTKPTSSFLFPSSSPSFFSLRRQHI
NIQTPIAASLKEDVGRFKKTLGDFISLNYWVVRDYYRLVDFVNALEPEIQ
RLSDEQLTAKTSEFKKRLSQGDNISDIQAEAFAVVREAARRKLGMRHFDV
QIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGDGVHVVTVNDYLA
QRDAEWMGRVHRFLGLSVGLIQKGMTAEERRINYQCDITYTNNSELGFDY
LRDNLAGNSDQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDA
ARYPVAAKVAELLTRGLHYNVELKDNSVELTEEGIALAELALETNDLWDE
NDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEG
IHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEREFL
KMFQMPVIEVPTNLPNIRKDLPIQAFATARGKWEYVSQEVEYMFRQGRPV
LVGTTSVENSEYLSDLLKERNIPHNVLNARPKYAAREAEIIAQAGRKYAI
TISTNMAGRGTDIILGGNPKMLAREIIEDSLLSFLTREAPNLEADDMGIS
KKVLSKIKVGPSSMALLAKAALMAKYVGKSEGKSWTYQEAKSIISESVEM
SQSMPLKELRKLIDEQSEMYPLGPSIAITYLSVLKDCEVHCTKEGFEVKR
LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNF
DTEWAVKLISKITNDEDIPIEGDAIVKQLLALQINAEKYFFNIRKSLVEF
DEVLEVQRKHVYDLRQLILTGDNESCSQHIFQYMQAVVDEIVFGNADPLQ
HPRYWSLAKLLKEFIAIAGKLLDDSFASITEEDLLQSLKQLHESNSVDID
NLHLPNLPKPPDCFRGIRRKISSLKRWLAICSDDSTKNGRYRPTTNILRK
YLGDILIASYLNIVEESGYDDAYIKEIERAVLVKTLDCFWRDHLVNMNRL
SSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLLHYWSSPME
SQELFLS* back to top
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