Tc08v2_t010770.2

Overview
NameTc08v2_t010770.2
Unique NameTc08v2_t010770.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1077
Properties
Property NameValue
NoteCaffeic acid 3-O-methyltransferase
Model evidenceSupporting evidence includes similarity to: 13 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productcaffeic acid 3-O-methyltransferase-like, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID108663133
GenbankXM_018126332.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g010770Tc08v2_g010770Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p010770.2Tc08v2_p010770.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto406690auto406690Theobroma cacaoexon
exon-auto406691auto406691Theobroma cacaoexon
exon-auto406692auto406692Theobroma cacaoexon
exon-auto406693auto406693Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto406694auto406694Theobroma cacaoCDS
CDS-auto406695auto406695Theobroma cacaoCDS
CDS-auto406696auto406696Theobroma cacaoCDS
CDS-auto406697auto406697Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t010770.2 ID=Tc08v2_t010770.2|Name=Tc08v2_t010770.2|organism=Theobroma cacao|type=mRNA|length=1077bp
ATGACCCAGGAAGATCAAGACCAAGAACTTGGCAAGCTAGCCGTCCGGCT
AGCCAACGCCGTCATTCTTCCCATGGTATTAAAATCAGCCCTAGAGCTGA
ACATCATCGACACAATCTCCGCCGCTGGTGACGGCACGTTTCTATCACCT
TCCCAGATCGCGAGTGGCCTTCCCACCAAGAATCCTGAAGCGTCTGTGCT
ACTAGATAGAATGCTACGCCTGTTGGCTAGCTATTCCATTCTGAAGTGCT
CGGTAAGAACAAAGGAAAGCGGAGAAGTTGAGAGACTCTACGGTGCAGGG
CCCTTATGCAAGTTCCTTGTTAAGAATCAGGATGAAGGGTCTGTTGCTCC
TCTGTTTTTGTTGCACCATGACAAAGTCTTCATGGAAAGCTGGTACCATT
TAAATGATGTTATACTAGAAGGAGGGATTCCTTTTAACAGGGCATATGGG
ATGACAGCATTTGAGTATCCAGGAACAGATCTAAGGTTCAACAGGGTATT
TAACCAGGCTATGTCCAATCACACTACTTTGATCATGAGGAAGATTCTTG
ATGTTTACAAAGGGTTTGATGAGGTGGAAGTGTTGGTTGATGTTGGTGGT
GGAATTGGAGTTGCTCTCAGTATCATTACTTCTAAGTATCCTCATATCAA
GGCAATCAATTTTGATCTGCCTCATGTTTTGGCTGATGCACCAACTTATT
CAGGTGTAGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGT
GATGCCATTTTCATGAAGTGGATACTCCATGATTGGAGTGATGAGCATTG
CTTGAAGCTTCTCAAGAACTGCTGGGAAGCTCTCCCTAATGGTGGCAAAG
TAATCATTGTGGAATCAATCCTCCCTGAGGCTCCTGATAGCAGTGTTTCT
TCCAACATTGTTTGTGAGCAAGATCTATTGATGTTAGCTCAAAACCCTGG
GGGCAAAGAGAGAACCCGAAAAGAATATGAAGCCTTGGCTTTAAGAACCG
GCTTCTCTGGCTGTGAAGTCATCTGCTGTGCTTATAACAGCTGGGTCATG
GAGTTCCACAAAAGAGAAAATCTTTGA
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protein sequence of Tc08v2_p010770.2

>Tc08v2_p010770.2 ID=Tc08v2_p010770.2|Name=Tc08v2_p010770.2|organism=Theobroma cacao|type=polypeptide|length=359bp
MTQEDQDQELGKLAVRLANAVILPMVLKSALELNIIDTISAAGDGTFLSP
SQIASGLPTKNPEASVLLDRMLRLLASYSILKCSVRTKESGEVERLYGAG
PLCKFLVKNQDEGSVAPLFLLHHDKVFMESWYHLNDVILEGGIPFNRAYG
MTAFEYPGTDLRFNRVFNQAMSNHTTLIMRKILDVYKGFDEVEVLVDVGG
GIGVALSIITSKYPHIKAINFDLPHVLADAPTYSGVEHVGGDMFESVPKG
DAIFMKWILHDWSDEHCLKLLKNCWEALPNGGKVIIVESILPEAPDSSVS
SNIVCEQDLLMLAQNPGGKERTRKEYEALALRTGFSGCEVICCAYNSWVM
EFHKRENL*
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