Tc08v2_t010180.1

Overview
NameTc08v2_t010180.1
Unique NameTc08v2_t010180.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length996
Properties
Property NameValue
NoteFlavonol synthase/flavanone 3-hydroxylase
Model evidenceSupporting evidence includes similarity to: 25 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productflavonol synthase/flavanone 3-hydroxylase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592292
GenbankXM_007018933.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g010180Tc08v2_g010180Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p010180.1Tc08v2_p010180.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto405543auto405543Theobroma cacaoexon
exon-auto405544auto405544Theobroma cacaoexon
exon-auto405545auto405545Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto405546auto405546Theobroma cacaoCDS
CDS-auto405547auto405547Theobroma cacaoCDS
CDS-auto405548auto405548Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t010180.1 ID=Tc08v2_t010180.1|Name=Tc08v2_t010180.1|organism=Theobroma cacao|type=mRNA|length=996bp
ATGGAGGTTGAGAGAGTGCAAGCACTAGCCTTCGGCGGCCTCAATGAACT
CCCTGCTCAATTCATCCGCCCTGCCCACGAGCGACCAGAGAACAGCAAAC
CCATCGAAGGGGTTACTGTGCCGGTCATCTCCCTCTCACAGCCTCGTGAT
GTCCTTGTCAAAGAGGTCTCGGAGGCATGTAGCCAATGGGGGTTTCTCTT
GGTAACTGACCATGGGTTATCTCCTGAATTGATCAAACGGCTGCAACAAG
TGGGCCAGGAGTTCTTTGCTCTGCCGCAGAAGGAAAAGGAGGCTTATGCA
AATGATCCCTCATCAGGCAAGTTTGAAGGGTATGGCACAAAAATGACTAA
GAACCTTGAAGAGAAGGTTGAGTGGGTTGACTACTATTTTCATCTCATGT
CTCCTCCTTCTAAGGTCAATCATGATATATGGCCCAAGCACCCTCCTTCT
TACAGGGAAGTCAACGAAGAATACAGCAAGGAAATGCTAAGAATAACAGG
TGAGCTGTTGGGGCTCTTGTCTGAGGGGCTAGGTCTGGACAAAATGGCTC
TGGCGACCCCTTTGGGAGATCAAGAAATAGAACTGGAAATGAAAATAAAC
ATGTACCCACCATGCCCTCAACCTCATCTAGCCCTAGGAGTTGAACCCCA
CACAGACATGTCTGCACTCACCTTGCTTGTCCCTAATGATGTTCCGGGCC
TTCAAGTTTGGAAAGATGGCAGTTGGATTGCCGTTGATTACTTGCCTAAT
GCGCTCTTTGTCCATGTTGGCGACCAAATTGAGGTTCTGAGCAATGGGAA
ATACAAGAGTGTTCTTCATAGGAGTGTAGTTAACAAAGACCGCACTCGGA
TGTCATGGGCAGTGTTCTGCGCACCTCCACATGAGGCTATGATCGGACCA
CTTCCAGGGCTTGTGAACGAGCAAAACCCAGCTAAATATTCAACCAAAAC
ATTTGCCGAGTACCGATACCGGAAATTCAACAAGCTCCCTCAGTGA
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protein sequence of Tc08v2_p010180.1

>Tc08v2_p010180.1 ID=Tc08v2_p010180.1|Name=Tc08v2_p010180.1|organism=Theobroma cacao|type=polypeptide|length=332bp
MEVERVQALAFGGLNELPAQFIRPAHERPENSKPIEGVTVPVISLSQPRD
VLVKEVSEACSQWGFLLVTDHGLSPELIKRLQQVGQEFFALPQKEKEAYA
NDPSSGKFEGYGTKMTKNLEEKVEWVDYYFHLMSPPSKVNHDIWPKHPPS
YREVNEEYSKEMLRITGELLGLLSEGLGLDKMALATPLGDQEIELEMKIN
MYPPCPQPHLALGVEPHTDMSALTLLVPNDVPGLQVWKDGSWIAVDYLPN
ALFVHVGDQIEVLSNGKYKSVLHRSVVNKDRTRMSWAVFCAPPHEAMIGP
LPGLVNEQNPAKYSTKTFAEYRYRKFNKLPQ*
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