Tc08v2_t010150.1

Overview
NameTc08v2_t010150.1
Unique NameTc08v2_t010150.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1002
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productflavonol synthase/flavanone 3-hydroxylase
NoteFlavonol synthase/flavanone 3-hydroxylase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592290
GenbankXM_007018931.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g010150Tc08v2_g010150Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p010150.1Tc08v2_p010150.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto405518auto405518Theobroma cacaoexon
exon-auto405519auto405519Theobroma cacaoexon
exon-auto405520auto405520Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto405521auto405521Theobroma cacaoCDS
CDS-auto405522auto405522Theobroma cacaoCDS
CDS-auto405523auto405523Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t010150.1 ID=Tc08v2_t010150.1|Name=Tc08v2_t010150.1|organism=Theobroma cacao|type=mRNA|length=1002bp
ATGGAGGTGGAGAGAGTGCAAGGCATTGCTAATTTTTCCACAGAAACAAT
CCCGGAAGAGTTCATTCGGTCGACGAATGAGCAGCCAGGGCTCACAACGG
TTCAGGGGACCGTGCTGGAGGTCCCGGTCATCGATCTCAGCGACCCTGAT
GAAAAAAAGATGCTCGAAGCCATTATAGACGCGAGCCGTAATTGGGGGAT
ATTCCAGGTTGTGAATCATGGCATCCCTGATGAGGTCATAAGGAAGCTGC
AAGAGGCTGGCAAGGTTTTCTTTGAGCTCCCGCAAGAGGAAAAGGAGCTT
TACGCCAAGCCTCCTGGATCTCAAAGCATCGAAGGGTATGGAACTAAGCT
TCAAAAAGAACTGCAAGGGAAGAAAGCTTGGGTTGATCATCTATTCCACA
AGATATGGCCTCCTCGTGAAATTAACTATCAGTTTTGGCCTAAAAATCCA
CCTTCTTACAGAGAGGCAAACGAAGAATACACAAAGCACATGCATGGGGT
GGTAGACAAACTGTTTAGATGCCTTTCAGTAGGCTTAGGGCTGGAAGGGC
ATGAGTTGAAGGAGGCCGTGGGCGGTGAGAACTTGGTCTACCTTCTCAAG
ATCAACTACTATCCGCCGTGCCCACGGCCCGACCTGGCTCTCGGAGTGCC
GTCTCACACCGACATGTCCTCCCTCACCATACTGGTTCCCAATGACGTGC
AGGGCCTCCAAGCTAATAGAGATGGCCATTGGTATGATGTCAAATACATC
CCTAACGCCCTCGTTATTCACATTGGTGATCAAGTCGAGATTGCGAGCAA
TGGCATGTATAGGAGTGTACTTCACAGAACCACAGTGAACAAAGAGCAAA
CAAGGATTTCATGGCCAGTGTTCTTGGAGCCACCATCAGACTTAGAAGTA
GGACCTCACCCTAAGCTCGTTAATGAAGCAAATCCACCCAAATACAAAAC
CAAAAAGTACCGTGAATACTGTTACTGCAAGCTCAATAAGATTCCCCAGT
AA
back to top

protein sequence of Tc08v2_p010150.1

>Tc08v2_p010150.1 ID=Tc08v2_p010150.1|Name=Tc08v2_p010150.1|organism=Theobroma cacao|type=polypeptide|length=334bp
MEVERVQGIANFSTETIPEEFIRSTNEQPGLTTVQGTVLEVPVIDLSDPD
EKKMLEAIIDASRNWGIFQVVNHGIPDEVIRKLQEAGKVFFELPQEEKEL
YAKPPGSQSIEGYGTKLQKELQGKKAWVDHLFHKIWPPREINYQFWPKNP
PSYREANEEYTKHMHGVVDKLFRCLSVGLGLEGHELKEAVGGENLVYLLK
INYYPPCPRPDLALGVPSHTDMSSLTILVPNDVQGLQANRDGHWYDVKYI
PNALVIHIGDQVEIASNGMYRSVLHRTTVNKEQTRISWPVFLEPPSDLEV
GPHPKLVNEANPPKYKTKKYREYCYCKLNKIPQ*
back to top