Tc08v2_t009920.1

Overview
NameTc08v2_t009920.1
Unique NameTc08v2_t009920.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length777
Properties
Property NameValue
NotePutative Probable 6-phosphogluconolactonase 1
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Productprobable 6-phosphogluconolactonase 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592261
GenbankXM_007018890.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g009920Tc08v2_g009920Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p009920.1Tc08v2_p009920.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto404969auto404969Theobroma cacaoexon
exon-auto404970auto404970Theobroma cacaoexon
exon-auto404971auto404971Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto404972auto404972Theobroma cacaoCDS
CDS-auto404973auto404973Theobroma cacaoCDS
CDS-auto404974auto404974Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t009920.1 ID=Tc08v2_t009920.1|Name=Tc08v2_t009920.1|organism=Theobroma cacao|type=mRNA|length=777bp
ATGGAGAAGATAGAGCCAGAGCTGAGACTATTTGATAGCAGTGAAGAGCT
ATCGTCAGGTCTTGCTGACTATGTGCTTCAAGTCGCTGAATCTGCTGTGA
AAGATATAGGCTCTTTTTCTCTTGTTCTCTCTGGAGGAGACATACCGAAG
CGCTTAGGGAAACTGACCAAAGCACCGTTCTTGAGACTGGTGGACTGGCC
GAAATGGCATGTATTTTGGGCGGAGGAGAACGTCGTCGCCAAGTTACACC
CTGATAGCCTCTATTGGCAAGCCAAAGAATGTTTCATCTCCAAGGTTCCT
TTACTACCAGCACACATTATCTCTGTAAGCCATGGCGTAGAAGGGGAATC
AGCAGCGAGTAGCTACGAGTTCTCTATTAGGCAACAAGTCAAAAAACGAA
CGGTCCAAGCTTCTCCATCAAGCGACTGCCCGAGATTCGATCTTGTTCTC
CTATCCTTAGGGCCCAACGGCCACGTGGCGTCTCTGTATCCTAATGACCC
GGTTTTGCAAGAAGAGTCTCAGTGGGTTGCTTGTGTCTCCAAAGACGGTA
CGATAGAGAGCGTGACCCTCACTCTCCCGGTGATCAACGCGGCAGCCAAC
GTGGCGATCGTGGCCGCGGGGATGGATCTGGCCCGTCCTTTCATGGATGT
AATGGTGAGTCGTAAGCCCATTGGATCACATCCAGCTCAAATGGTCTCGC
CCCAAGATGGAAAGCTCGTTTGGTTTGTGGATGCTAGCGCTGCTTCGTTG
TTCCTACGTGGCAATGAACATCGTTAA
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protein sequence of Tc08v2_p009920.1

>Tc08v2_p009920.1 ID=Tc08v2_p009920.1|Name=Tc08v2_p009920.1|organism=Theobroma cacao|type=polypeptide|length=259bp
MEKIEPELRLFDSSEELSSGLADYVLQVAESAVKDIGSFSLVLSGGDIPK
RLGKLTKAPFLRLVDWPKWHVFWAEENVVAKLHPDSLYWQAKECFISKVP
LLPAHIISVSHGVEGESAASSYEFSIRQQVKKRTVQASPSSDCPRFDLVL
LSLGPNGHVASLYPNDPVLQEESQWVACVSKDGTIESVTLTLPVINAAAN
VAIVAAGMDLARPFMDVMVSRKPIGSHPAQMVSPQDGKLVWFVDASAASL
FLRGNEHR*
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