Tc08v2_t009740.4

Overview
NameTc08v2_t009740.4
Unique NameTc08v2_t009740.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length273
Properties
Property NameValue
NoteUncharacterized protein isoform 2 (Fragment)
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productuncharacterized LOC18592241, transcript variant X4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592241
GenbankXM_007018848.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g009740Tc08v2_g009740Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p009740.4Tc08v2_p009740.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto404612auto404612Theobroma cacaoexon
exon-auto404613auto404613Theobroma cacaoexon
exon-auto404614auto404614Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto404615auto404615Theobroma cacaoCDS
CDS-auto404616auto404616Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t009740.4 ID=Tc08v2_t009740.4|Name=Tc08v2_t009740.4|organism=Theobroma cacao|type=mRNA|length=273bp
ATGGAGTCCTCTTCATCGTCGACTTCGTCGAATTTTCTATCTTTTTGGAA
TTATCTCAATCTGCTACTAGTCCGTCCGATTATCGCAATCTTTTTCGTCC
TCTCCTTCATTTTTCTATGGTGGTGGTTGGCATGGAAGTTAGTTCTGGTA
CACGTGCCACTGGTTCAAGAAATTTTCGGTCTGAGGAAAAAACCGGTTAA
ACCAAAGCCGCCGACTCGTCGATTATCCAGATATTATAACAGCATCAACG
CTCAAAGTTCTTCTTCTCAGTAG
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protein sequence of Tc08v2_p009740.4

>Tc08v2_p009740.4 ID=Tc08v2_p009740.4|Name=Tc08v2_p009740.4|organism=Theobroma cacao|type=polypeptide|length=91bp
MESSSSSTSSNFLSFWNYLNLLLVRPIIAIFFVLSFIFLWWWLAWKLVLV
HVPLVQEIFGLRKKPVKPKPPTRRLSRYYNSINAQSSSSQ*
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