Tc08v2_t009590.1

Overview
NameTc08v2_t009590.1
Unique NameTc08v2_t009590.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1569
Properties
Property NameValue
NoteProbable glycerol-3-phosphate acyltransferase 3
Model evidenceSupporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Productprobable glycerol-3-phosphate acyltransferase 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592227
GenbankXM_018125630.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g009590Tc08v2_g009590Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p009590.1Tc08v2_p009590.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto404349auto404349Theobroma cacaoexon
exon-auto404350auto404350Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto404351auto404351Theobroma cacaoCDS
CDS-auto404352auto404352Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t009590.1 ID=Tc08v2_t009590.1|Name=Tc08v2_t009590.1|organism=Theobroma cacao|type=mRNA|length=1569bp
ATGGCAAAAATAAAGAAGCTCTTCCCACTAAAAGCTCTTTCCTTATTGTT
CGAAACCCTGCTTAAATCATCAGGGAAGCTGCCCTATCTAAGGTTCAAGG
TCAGCAATGGCCCTGCAACCCAATTCAAATTTCTTAAGCATTCCACACTT
GTCCATAGAACAGATGAGCTTGCAAACCAGACATTGGTTTTTCACGTGGA
GGGTGCACTCCTGAAGTCATGTTCACTGTTTCCTTACTTCATGCTGGTGG
CCTTTGAAGCAGGTGGGCTCTTTAGAGCACTTATCTTGCTTCTTTTGTAC
CCTCTTGTTTTGTTAATATGGAAGGAGCTTGGACTGAGGATTCTGGTTTT
TGTAAGCTTTGTTGGTATTACGAAGGAGAAGTTTAGAGCTGGGACTGCCA
TTTTGCCCAAGTTCTTCCTGGAAGATGTGGGTTGTGAAGGCTTTGATATA
GTGATGAGCTACAAAAAAAGGGTAGCAGTGACTGGAATGCCTAAAATCAT
GGTTGAAGGATTCTTAAGAGACTACTTGGGAATTGATGCTGTTGTTGCAA
GAGAGTTGAAGGAATTTCGCGGGTACTTCTTGGGTTTGATGGAGGAAAAG
ATGGATGCTGGACTTGTTATAAGCGAGTGTACTCATAATATTGGTTTAGG
TTGCTTCAGAAAATCTCACGATCAGAAGATTTTCTCACATTGCAAGGAAA
TTTACTTAGTAACAGAGGCAGAAAAGAAAAATTGGCAAGTCCTTCCAAGG
AAGAGATACCCAAAGCCATTAATCTTCCATGATGGGAGGTTGGCTTTTAG
GCCAACCCCATTAGCTGCGCTAATTATGTTCATTTGGCTTCCATTTGGCT
TCCTTCTGAACATCACCAGAACCATTGTTTTCATATCATTACCTTTTAAG
TTATCTATGCCTTTATTGGCCTTGTCTGGGTGTATAATTACAGTATCAAA
ACCAGAACCTACTACTGCTTCAATCAATGGTGAAAATAAACCAGGAGGCA
TGCTTTACGTTTGCAACCACAGAACTTTACTAGACCCACTTTTTTTAAGT
GCAGTTCTCATGAAGTCTGTCTATGCTGTCACCTACAGCATTAGTAGATT
CAGTGAGGTAATTTCCCCTATTAAGACGGTCAGGTTATCAAGAGATCGAG
AGAAAGATGGAAAAATTATGAAGAAGCTTTTGAGCCAAGGTGACCTTGTC
GTTTGCCCCGAAGGAACCACTTGCAGAGAACCCTATCTGCTAAGGTTCAG
CCCGTTATTCGCAGAGATGACTGATGAAATAGTTCCTGTAGCAATAAAAT
TGCAGGTTAGCCTGTTCTACGGATCTACAGCTAGCGGACTCAAATGTTTG
GACTCAACATTTCACCTCATGAATCCAAATCCTATGTGCTCGGTCAAGAT
TCTTAACAAGTTGCCAAGTTGCCAAACACATAATACTGGAGGGAAATCAA
AGTTCGAAGTTACCAATCATGTGCAGAATCAGATTGCAGCAGCTTTAGGA
TTTGAGTGTACCAATCTTACAAGGAAAGACAAGTATGCAATCTTGGCAGG
CAATGAGGGGATCGTATAG
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protein sequence of Tc08v2_p009590.1

>Tc08v2_p009590.1 ID=Tc08v2_p009590.1|Name=Tc08v2_p009590.1|organism=Theobroma cacao|type=polypeptide|length=523bp
MAKIKKLFPLKALSLLFETLLKSSGKLPYLRFKVSNGPATQFKFLKHSTL
VHRTDELANQTLVFHVEGALLKSCSLFPYFMLVAFEAGGLFRALILLLLY
PLVLLIWKELGLRILVFVSFVGITKEKFRAGTAILPKFFLEDVGCEGFDI
VMSYKKRVAVTGMPKIMVEGFLRDYLGIDAVVARELKEFRGYFLGLMEEK
MDAGLVISECTHNIGLGCFRKSHDQKIFSHCKEIYLVTEAEKKNWQVLPR
KRYPKPLIFHDGRLAFRPTPLAALIMFIWLPFGFLLNITRTIVFISLPFK
LSMPLLALSGCIITVSKPEPTTASINGENKPGGMLYVCNHRTLLDPLFLS
AVLMKSVYAVTYSISRFSEVISPIKTVRLSRDREKDGKIMKKLLSQGDLV
VCPEGTTCREPYLLRFSPLFAEMTDEIVPVAIKLQVSLFYGSTASGLKCL
DSTFHLMNPNPMCSVKILNKLPSCQTHNTGGKSKFEVTNHVQNQIAAALG
FECTNLTRKDKYAILAGNEGIV*
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