Tc08v2_t009570.1

Overview
NameTc08v2_t009570.1
Unique NameTc08v2_t009570.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1332
Properties
Property NameValue
NoteAminotransferase ALD1
Model evidenceSupporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productaminotransferase ALD1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592224
GenbankXM_018126240.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g009570Tc08v2_g009570Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p009570.1Tc08v2_p009570.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto404295auto404295Theobroma cacaoexon
exon-auto404296auto404296Theobroma cacaoexon
exon-auto404297auto404297Theobroma cacaoexon
exon-auto404298auto404298Theobroma cacaoexon
exon-auto404299auto404299Theobroma cacaoexon
exon-auto404300auto404300Theobroma cacaoexon
exon-auto404301auto404301Theobroma cacaoexon
exon-auto404302auto404302Theobroma cacaoexon
exon-auto404303auto404303Theobroma cacaoexon
exon-auto404304auto404304Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto404305auto404305Theobroma cacaoCDS
CDS-auto404306auto404306Theobroma cacaoCDS
CDS-auto404307auto404307Theobroma cacaoCDS
CDS-auto404308auto404308Theobroma cacaoCDS
CDS-auto404309auto404309Theobroma cacaoCDS
CDS-auto404310auto404310Theobroma cacaoCDS
CDS-auto404311auto404311Theobroma cacaoCDS
CDS-auto404312auto404312Theobroma cacaoCDS
CDS-auto404313auto404313Theobroma cacaoCDS
CDS-auto404314auto404314Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t009570.1 ID=Tc08v2_t009570.1|Name=Tc08v2_t009570.1|organism=Theobroma cacao|type=mRNA|length=1332bp
ATGTATTATTCTCAGCATTTATCATGCATTTGCATACCTCATGCAGTGTT
GTTACAACCTAAAAGAAGTTGGAGCAGTTCACATTCTAATGCTGGGAAGA
GACTTGGTCATTGCACACAGGTTCCACGAAATGTGAACTTGGAAAAACTG
CGGAGTGGATATCTGTTTCCTGAGATATCCAGGCGAGAGTCTGAACACAT
GCAGAAGAATCCACACGCAAGCTTACTAAGACTTGGTATTGGTGATACAA
CAGAACCAATACCGGACATCATAACACTAGCAATGGTTGAGCATGTACGT
GGCCTATCAACAATTCTAGGTTATAGAGGATATGGAGCTGAACAAGGCAA
CATGGCACTAAGAAAGGCTATCGCAGAAAAACTTTACCAGGATATGGGTA
TAAAAGCTGATGAGATTTTTGTATCTGACGGTGCACAGTGTGACATTTCT
CGCCTTCAGATGCTTCTGGGACCCAATGTGACAGTGGCAGTGCAGGATCC
ATCCTTTCCAGCCTATATCGATTCAAGTGTCATAGTTGGTCAAGCTGGCG
AGTTAGAAGAGGAAACTGGGAAGTATGAAAACATAATCTACATGAACTGT
GGCCCTGAGAATAATTTCTTTCCCGACCTGTCAACTACTCCAAGGACAGA
TATCATTTTCTTTTGTTCTCCAAACAATCCCACTGGTCATGCTGCATCGC
GGCAGCAACTAAAGCAACTCGTAGCGTTTGCAAAGGCTAATGGGTCTATA
ATAATTTACGACTCTGCATATGCTGCTTATATCACAGATGAAAGCCCCAG
ATCAATCTTTGAAATTCCTGGTGCCAAAGAGGTTGCTATTGAAATTTCAT
CCTTCTCCAAATTTGCTGGGTTTACAGGTGTGCGACTTGGCTGGTCAGTG
GTCCCTAAAGAGCTGCTGTACTCCAATGGGTTCCCTGTTATAAAGGATTT
CAACCGCATTGTGTGCACTTGCTTTAATGGTGCATCAAATATTGCTCAGG
CTGGAGGCCTTGCATGCCTTTCAACAGATGGTTACCAGGCACTACGTAAT
GTTATTGACTACTACATGGAGAATGCCAACATAATTGTTGATGCATTTTC
ATCGCTTGGTTCGAACGTCTATGGAGGCACGAATGCACCTTATATATGGG
CACACTTTCCAGGATTGAGTTCTTGGAATGTATTCAGTGAAATTCTTGAG
AAAACAAACATAGTGACTGTTCCAGGCAGGGGATTTGGTCCTGGAGGCGA
AGAGTATATTAGAGTCAGTTCATTTGGTCAAAGAGAACGTATAATAGAAG
CTTCGAGGAGGCTAAAAAGATTTCTAAGATGA
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protein sequence of Tc08v2_p009570.1

>Tc08v2_p009570.1 ID=Tc08v2_p009570.1|Name=Tc08v2_p009570.1|organism=Theobroma cacao|type=polypeptide|length=444bp
MYYSQHLSCICIPHAVLLQPKRSWSSSHSNAGKRLGHCTQVPRNVNLEKL
RSGYLFPEISRRESEHMQKNPHASLLRLGIGDTTEPIPDIITLAMVEHVR
GLSTILGYRGYGAEQGNMALRKAIAEKLYQDMGIKADEIFVSDGAQCDIS
RLQMLLGPNVTVAVQDPSFPAYIDSSVIVGQAGELEEETGKYENIIYMNC
GPENNFFPDLSTTPRTDIIFFCSPNNPTGHAASRQQLKQLVAFAKANGSI
IIYDSAYAAYITDESPRSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWSV
VPKELLYSNGFPVIKDFNRIVCTCFNGASNIAQAGGLACLSTDGYQALRN
VIDYYMENANIIVDAFSSLGSNVYGGTNAPYIWAHFPGLSSWNVFSEILE
KTNIVTVPGRGFGPGGEEYIRVSSFGQRERIIEASRRLKRFLR*
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