Tc08v2_t008300.1

Overview
NameTc08v2_t008300.1
Unique NameTc08v2_t008300.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1854
Properties
Property NameValue
NotePyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha
Model evidenceSupporting evidence includes similarity to: 25 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productpyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592071
GenbankXM_007018578.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g008300Tc08v2_g008300Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p008300.1Tc08v2_p008300.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto401138auto401138Theobroma cacaoexon
exon-auto401139auto401139Theobroma cacaoexon
exon-auto401140auto401140Theobroma cacaoexon
exon-auto401141auto401141Theobroma cacaoexon
exon-auto401142auto401142Theobroma cacaoexon
exon-auto401143auto401143Theobroma cacaoexon
exon-auto401144auto401144Theobroma cacaoexon
exon-auto401145auto401145Theobroma cacaoexon
exon-auto401146auto401146Theobroma cacaoexon
exon-auto401147auto401147Theobroma cacaoexon
exon-auto401148auto401148Theobroma cacaoexon
exon-auto401149auto401149Theobroma cacaoexon
exon-auto401150auto401150Theobroma cacaoexon
exon-auto401151auto401151Theobroma cacaoexon
exon-auto401152auto401152Theobroma cacaoexon
exon-auto401153auto401153Theobroma cacaoexon
exon-auto401154auto401154Theobroma cacaoexon
exon-auto401155auto401155Theobroma cacaoexon
exon-auto401156auto401156Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto401157auto401157Theobroma cacaoCDS
CDS-auto401158auto401158Theobroma cacaoCDS
CDS-auto401159auto401159Theobroma cacaoCDS
CDS-auto401160auto401160Theobroma cacaoCDS
CDS-auto401161auto401161Theobroma cacaoCDS
CDS-auto401162auto401162Theobroma cacaoCDS
CDS-auto401163auto401163Theobroma cacaoCDS
CDS-auto401164auto401164Theobroma cacaoCDS
CDS-auto401165auto401165Theobroma cacaoCDS
CDS-auto401166auto401166Theobroma cacaoCDS
CDS-auto401167auto401167Theobroma cacaoCDS
CDS-auto401168auto401168Theobroma cacaoCDS
CDS-auto401169auto401169Theobroma cacaoCDS
CDS-auto401170auto401170Theobroma cacaoCDS
CDS-auto401171auto401171Theobroma cacaoCDS
CDS-auto401172auto401172Theobroma cacaoCDS
CDS-auto401173auto401173Theobroma cacaoCDS
CDS-auto401174auto401174Theobroma cacaoCDS
CDS-auto401175auto401175Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t008300.1 ID=Tc08v2_t008300.1|Name=Tc08v2_t008300.1|organism=Theobroma cacao|type=mRNA|length=1854bp
ATGGACTCTGATTTCGGCATTCCCAGAGAACTTTCCGATCTTCAGAAACT
CCGATCTCAATACCAACCAGGACTCCCTCCTTGCCTCGAGGGAACTACTG
TCAGGGTTGAGTTTGGTGATGCCACCACAGCTTTAGACCCAGCTGATGCC
CATACCATTACTCGTGCTTTTCCACACACTTATGGTCAGCCCTTGGCTCA
CTTTCTCAGGGCAACTGCAAAAGTACCTGATGCTCAGATTATAACGGAGC
ATCCAGCTATGAGGGTCGGTCTTGTCTTTTGTGGGAGACAATCCCCTGGT
GGGCATAATGTCATATGGGGCCTTCACAAAGCTCTCAAAATCCACAACCC
CAACAGCACTTTGCTCGGCTTTTTGGGTGGTACTCAAGGTTTATTTGCAC
AGAAAACTTTAGAGATCACAGATGACATTCTTTCAACCTACAAAAATCAA
GGTGGTTATGATTTGCTGGGACGAACACAAGATCAAATTAGAACGACTGA
ACAAGTTAATGCTGCATTAACTGCATGCAATGATTTGAAGTTGGATGGCC
TTGTCATTATTGGAGGTGTAACATCAAACACGGATGCTGCTCAACTTGCT
GAAACATTTGCTGAAGCTAAATGTCAAACAAAGGTGGTTGGTGTTCCTGT
TACACTGAATGGAGACCTCAAGAATCAATTTGTGGAAGCTAATGTTGGTT
TTGATACAATATGCAAGGTCAATTCCCAGCTCATCAGCAATGTCTGCACT
GATGCTCTCTCTGCGGAAAAGTATTATTACTTTATCCGTCTTATGGGAAG
GAAGGCCTCGCATGTTGCACTGGAATGCACCCTCCAATCTCATCCAAATA
TGGTAATTCTTGGTGAGGAGGTGGCTGCGTCAAAGCTTACTCTTTTTGAC
ATAACAAAGCAAATATGTGATGCGGTTCAAGCCAGGGCAGAGCAAGACAA
GAACCACGGGGTCATCCTTCTGCCTGAAGGGCTTATAGAAAGTATTCCTG
AAGTGTATGCTCTGTTGAAGGAAATTCACAGTTTGCTCAGGCAAGGTGTT
TCTGCTGAAAAAATTTCTTCTCAACTTTCACCTTGGGCATCAGCTTTGTT
TGAATTTTTGCCACCTTTTATAAGGAGACAGCTTCTCCTCCATCCTGAAT
CAGATGATTCTGCACAGTTGTCACAGATTGAGACAGAGAAACTTCTGGCG
CACCTTGTAGAGACTGAAATTAATAAGCGCCTGAAAGCAGGTACTTACAA
GGGGAAAAAATTTAATGCTATCTGCCACTTCTTCGGGTATCAGGCTCGTG
GATCCTTACCATCAAAATTCGACTGTGACTATGCCTATGTTCTTGGGCAT
ATCTGCTATCATATTCTTGCAGCTGGTTTAAATGGTTACATGGCAACTAT
TACTAACCTAAAAAATCCAGTGAACAAGTGGCGCTGTGGTGCTGCACCTA
TTACAGCAATGATGAGTGTGAAGCGCTGGTCTCAGAATCCCAATGCCTTG
TCAATTGGAAAACCTGCTATTCATCCAGCTACTGTGGATTTGAAAGGCAA
AGCATACGAGCTGCTGAGACAAAACGCAGCAAGGTTTTTGCTGGATGATA
TCTACAGAAATCCAGGACCCCTTCAGTTTGATGGTCCTGGTGCTGATGCT
AAGGCTGTGACCTTGTGCGTTGAAGACCAGGATTACATGGGCCGCATCAA
GAAACTCCAGGAATATCTTGAAAAGGTCCGTACCATTGTGAAGCCAGGGT
GTTCTCAAGAAGTTCTGAAAGCGGCTTTAAGCGTAATGGCATCTGTGACA
GAGGTTCTCTCTGTGATGTCTTCGTCGTCATCAGGCGGACAGACAACCCT
TTGA
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protein sequence of Tc08v2_p008300.1

>Tc08v2_p008300.1 ID=Tc08v2_p008300.1|Name=Tc08v2_p008300.1|organism=Theobroma cacao|type=polypeptide|length=618bp
MDSDFGIPRELSDLQKLRSQYQPGLPPCLEGTTVRVEFGDATTALDPADA
HTITRAFPHTYGQPLAHFLRATAKVPDAQIITEHPAMRVGLVFCGRQSPG
GHNVIWGLHKALKIHNPNSTLLGFLGGTQGLFAQKTLEITDDILSTYKNQ
GGYDLLGRTQDQIRTTEQVNAALTACNDLKLDGLVIIGGVTSNTDAAQLA
ETFAEAKCQTKVVGVPVTLNGDLKNQFVEANVGFDTICKVNSQLISNVCT
DALSAEKYYYFIRLMGRKASHVALECTLQSHPNMVILGEEVAASKLTLFD
ITKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGV
SAEKISSQLSPWASALFEFLPPFIRRQLLLHPESDDSAQLSQIETEKLLA
HLVETEINKRLKAGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGH
ICYHILAAGLNGYMATITNLKNPVNKWRCGAAPITAMMSVKRWSQNPNAL
SIGKPAIHPATVDLKGKAYELLRQNAARFLLDDIYRNPGPLQFDGPGADA
KAVTLCVEDQDYMGRIKKLQEYLEKVRTIVKPGCSQEVLKAALSVMASVT
EVLSVMSSSSSGGQTTL*
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