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Properties
Property Name | Value |
Note | Tetratricopeptide repeat protein SKI3 |
Model evidence | Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns |
Product | tetratricopeptide repeat protein SKI3, transcript variant X1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc08v2_t008220.2 ID=Tc08v2_t008220.2|Name=Tc08v2_t008220.2|organism=Theobroma cacao|type=mRNA|length=3531bp ATGGATGATTTTCAGGAGGAAGAAGAAAGAAGGCGGCTGGAGGAGTTGGT GGAAAGCAATCCAGATGACCCTTCCCTTCATTTTCAACTTGGAGCATACT TGTGGGAGACAGGCATAGGGAAGGAGAAAGCGGCAGAGCATTGGGTGATT TCCGCAAAACAAAACCCTAACAATGCGGCAGCCTTCAGGTACTTGGGCCA TTACTACGCCACTGTTTCGGCTGATGTCCAGAGAGCCATCAAGTGTTACC AGAGAGCTCTATCCCTGCATCCTGATGATTCCGATGCTGGGGAAGCTTTG TGTGATTTGTTGGACCGACAAGGAAAGGAGACCTTGGAGCTCGCAGTTTG CAAAGATGCTTCTCACAACTCTCCCAGGGCTTTCTGGGCTTTCCGCCGAT TGGGTTTTCTCCAGGTGCATCAAAAGAAATGGTCTGAAGCTGTAGAAAGT CTTCAACATGCCATTCGAGGTTATCCTACCTCTCCTGATTTGTGGGAAGC GCTTGGTCTTGCTTACCACCGTCTTGGCATGTTTACTGCCGCTATTAAGT CCTATGGGCGTGCGGTTGAATTGGAAGATACAAGAATCTTTGCACTGGTT GAATGTGGAAACGTCTTTTCGATGCTTGGTTCATTTAGAAAGGGAATTGA GCAATTTCAGCAAGCACTGAAGATCTCGCCACAAAATCTGTCTGCACTCT ATGGACTTGCTTCTGGGCTGCTTGGTCTATCAAAAGAATGTATAAACTCA GGAGCATTTAGTTGGGGAGCTTCATTGTTGGAGGATGCATGTACAGTAGC AGAAGTAAGCATCCAATTAGCTGGAAATTCATCATGTACTTGGAAGTTGC ATGGTGATATTCAGCTTACATATGCACAAAGTTATCCATGGATGGAGGAG AGCCAGAGTTTAGAATATAATGTGGAAACTTTCAACGAGTCCATATATTC GTGGAAGAATACTTGTTCTTTGGCTGCTATGTCTGCTAGAAACTCTTATC AACGTGCTTTGCACTTAGCCCCATGGCAGGCTAACATCTATATTGACATT GCAATTTGTTCCGATCTTATCTCTTCGTTCAACATGGATTGTACACATGA TCGTTGTACTTGGCAACTATCAGAGAAGATGACATTTGGGGCTTTAGTAC TGGAGGGTGACAATTATGAGTTCTGGGTGGCTTTGGGCTGTTTGTCTCAC TGTAATGCATTGAAACAGCATGCTTTAATTCGGGGACTGCAATTGGATGT GTCTTTAGCTAATGCTTGGGCATATCTTGGAAAGCTTTATAGAGAAGAGA ATGAGAAGGAATTGGCTAGGAAAGCATTTGACTGTTCTAGAGGTATAGAT CCATCATTGGCGTTACCATGGGCGGGCATGTCAGCTGATACTCATACTGG GGAGTCAACACCAGATGATGCTTTTGAGAGCTGCCTACGTGCCGTGCAGA TATTACCTGTTGCAGAGTTCCAAATTGGTCTTGCTAAGCTTGCTTTGCTT TCAGGGAACCTTTCATCTTCACAGGTATTTGGAGCTATCCAGCAGGCAGT GCAACGCGCACCTCATTATCACGAATCCCATAATTTAAATGGGCTAGCGT GTGAGGCACGTTTCCATTTTCAATCTGCCATTGCTTCTTATAGACTAGCA CGTTATGCTACCACCACCATTTCTTCAGGCACTGTCTTGAAATCTCATTT GAAAGACATATCAACTAATTTGGCCAGATCACTTTGTAAGGCAGGGAGTG CCATAGATGCCGTGCAAGAATGCGAAGACTTGAAGAGAAAAGGTATGCTT GATGCAGAAGGTTTGCAAGTGTATGCTTTCTCCTTATGGCAACTTGGTGA GCATGAGGTGGCCCTCTCTGTGACTAGAACCCTAGCTGCCAGTGTTTCTA CCATGGATAGGACATCTGCAGCTGTGTCTGTTAGTTTCATTTGTAGATTG CTGTACTACATTTCTGGACAGGATTCAGCAATTGTTAGCATTCTGAAAAT GCCAAAGGAACTATTTCAGAGTTCAAAAATAAGCTTTATTGTCTCTGCCA TTAATGCTCTGGATCAGAATAATAGCCTGGAATCAATTGTTTCTAGCAGT CGTTACTTTCTTGCATCACATGGGGAGATCACTGGAATGCACTATTTAAT CGCACTTAGTAAACTAATTAAACATGGGGCAGAACACCACCTTGGATTTC AGAGCGGAGTCAGTCATCTTAGAAAAGCTCTTCACATGTACCCTAACAGT AATTTACTAAGGAACCTACTTGGTTATCTTTTGCTGGCCAGTGAAGAATG GGGAAATATTCATGTTTCAAGTAGATGCTCCGTTGTCAATGCTTCTGAAT CTAAGAATAATGAAGGCTTAAAATTGGCCTGGGAGATCTTCAGTGCTGGG ACAGTTGCTTGCCATGCGATGGGCAATAGCAAACCAAGGTTTTCTTTTCC GACATGTGGCTGTCAATGCCCAAGTGGTTCTGGAGCTATGCAAGAACTGC AGAAGTGCTTACGGCTAGAGCCATGGAACCGTAATGCACGATACCTGCTT GTGCTTAATCTCTTACAGAAAGCGCGTGAAGAGAGATTTCCTGTAAATGT TTGTATCATACTTGAACGTCTCATAATTGTGGCTCTTTCTGATGAGTTCT ATTCTGGAAAAGAAGCCTGTTGTCAATATCAGAAGTTTCAGCTTTATCTA TGTGCTTCTGAAATATTTTTGCAAAGGGGGGATATCATTGGATGTATCAA CCATTCAAAAAGTGCTTCAGCACTTTTGCTTCCCGATAGCTACCAGTTTT TTGGGCACTTACTATTATGCCGTGGTTATGCTGCAGAAGGCAATTTTAAA AATTCAAAAGAAGAGTATGAAAGGTGCTTGGAGCTTAAGACAGATTTTCA TGCTGGTTGGGTATGCCTAAAATTAATGGAATCTCAATATGAAGTGCAAA CCTTTTCAAATGTTGTTGAGTTAAGGTTCAAGGAATGCTCAAAAGGGCGG AATAAGTCATGGAATATGTGGATGGCTGTATATAGTTTAGTGATGGGTCT GACATGTATATGGAATCAGGATTTTCCTTCTGCAGAGAAATTTCTGGAGC AAGCTTGTTCATTAGCCAGTGCGGAAAGCTGCATTTTCCTTTGTCATGGT GTCACTTTTATGGAGCTAGCACGGCTGTTTCATGATTCGCAATTTTTATC AAGTGCCATAAGGAGTCTCAGTAAAACTCATATGACTTCCTTGGTCCCAA TACCTATCGTCTCAGCATTGTTGGCCCAAGCAGAAGGAAGCCTTGGTTCT AGGAAAAAATGGGAGAGAAACCTTCGTCTTGAATGGTTTTCTTGGCCACC AGAAATGAGACCTGCAGAGCTCTTTTTTCAAATGCATTTGCTTGCAAGAC AGATTGAATCTGATTCTGACAGTTCGTCCAGGGTGGAGTGCTGTCAAAGT CCCCAGCAATGGGTTCTTCGGGCAATCCATGCAAACCCTTCTAACTTGAG ATATTGGAAAGTTCTGCAACAGCTTGTGTAA back to topprotein sequence of Tc08v2_p008220.2 >Tc08v2_p008220.2 ID=Tc08v2_p008220.2|Name=Tc08v2_p008220.2|organism=Theobroma cacao|type=polypeptide|length=1177bp
MDDFQEEEERRRLEELVESNPDDPSLHFQLGAYLWETGIGKEKAAEHWVI SAKQNPNNAAAFRYLGHYYATVSADVQRAIKCYQRALSLHPDDSDAGEAL CDLLDRQGKETLELAVCKDASHNSPRAFWAFRRLGFLQVHQKKWSEAVES LQHAIRGYPTSPDLWEALGLAYHRLGMFTAAIKSYGRAVELEDTRIFALV ECGNVFSMLGSFRKGIEQFQQALKISPQNLSALYGLASGLLGLSKECINS GAFSWGASLLEDACTVAEVSIQLAGNSSCTWKLHGDIQLTYAQSYPWMEE SQSLEYNVETFNESIYSWKNTCSLAAMSARNSYQRALHLAPWQANIYIDI AICSDLISSFNMDCTHDRCTWQLSEKMTFGALVLEGDNYEFWVALGCLSH CNALKQHALIRGLQLDVSLANAWAYLGKLYREENEKELARKAFDCSRGID PSLALPWAGMSADTHTGESTPDDAFESCLRAVQILPVAEFQIGLAKLALL SGNLSSSQVFGAIQQAVQRAPHYHESHNLNGLACEARFHFQSAIASYRLA RYATTTISSGTVLKSHLKDISTNLARSLCKAGSAIDAVQECEDLKRKGML DAEGLQVYAFSLWQLGEHEVALSVTRTLAASVSTMDRTSAAVSVSFICRL LYYISGQDSAIVSILKMPKELFQSSKISFIVSAINALDQNNSLESIVSSS RYFLASHGEITGMHYLIALSKLIKHGAEHHLGFQSGVSHLRKALHMYPNS NLLRNLLGYLLLASEEWGNIHVSSRCSVVNASESKNNEGLKLAWEIFSAG TVACHAMGNSKPRFSFPTCGCQCPSGSGAMQELQKCLRLEPWNRNARYLL VLNLLQKAREERFPVNVCIILERLIIVALSDEFYSGKEACCQYQKFQLYL CASEIFLQRGDIIGCINHSKSASALLLPDSYQFFGHLLLCRGYAAEGNFK NSKEEYERCLELKTDFHAGWVCLKLMESQYEVQTFSNVVELRFKECSKGR NKSWNMWMAVYSLVMGLTCIWNQDFPSAEKFLEQACSLASAESCIFLCHG VTFMELARLFHDSQFLSSAIRSLSKTHMTSLVPIPIVSALLAQAEGSLGS RKKWERNLRLEWFSWPPEMRPAELFFQMHLLARQIESDSDSSSRVECCQS PQQWVLRAIHANPSNLRYWKVLQQLV* back to top
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