Tc08v2_t008190.1

Overview
NameTc08v2_t008190.1
Unique NameTc08v2_t008190.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length588
Properties
Property NameValue
NoteCalcium-binding protein CML38
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productcalcium-binding protein CML39
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592059
GenbankXM_018125931.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g008190Tc08v2_g008190Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p008190.1Tc08v2_p008190.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto400722auto400722Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto400723auto400723Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t008190.1 ID=Tc08v2_t008190.1|Name=Tc08v2_t008190.1|organism=Theobroma cacao|type=mRNA|length=588bp
ATGAATTCTAATGGTGATTTCATTGCTACTACTAGTACTACTGCTAGCAG
CAATTCACAGCCAAAATCAGTACTCGCTAGTTTGAGGAGGAAACTATCCC
CAAGAACAAAGTCATGTTCTGAAGATGCTAGAAGATGCAGCAGCAGAAGC
AGTAACATCAGCGAGGCCAGCTCCGACCTCCAAATGGTGTTTGATTTCAT
TGACGCAAACGGTGATGGAAAAATATCAGCAGAAGAATTGCAGAGGTGCG
TAAGAACAGCGGGAGGGCACCTGTCCATGGACGAAGCCGAATTAGCCGTT
AAGTCATCAGACTTGGACGGAGACGGGATGCTGGGGTTCCATGAATTTCA
GGAGCTGGTGGAGGGTGGAGGCTCCACTGAGGAGGAGAGAAAAAAAGAGC
TGAGGGAGGCTTTTGGGATGTATGTGATGGAAGGTTCAGAGTGCATAACC
CCCGCCAGTTTGAGAAGGATGCTCCGTCGGCTGGGTGAGTCCAAGTCTAT
CAAGGATTGCAAGGCCATGATTCGTGCCTTTGATCTCAACGGAGACGGCG
TACTCAGCTTTGATGAGTTCAGTGTCATGATGCGGTGA
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protein sequence of Tc08v2_p008190.1

>Tc08v2_p008190.1 ID=Tc08v2_p008190.1|Name=Tc08v2_p008190.1|organism=Theobroma cacao|type=polypeptide|length=196bp
MNSNGDFIATTSTTASSNSQPKSVLASLRRKLSPRTKSCSEDARRCSSRS
SNISEASSDLQMVFDFIDANGDGKISAEELQRCVRTAGGHLSMDEAELAV
KSSDLDGDGMLGFHEFQELVEGGGSTEEERKKELREAFGMYVMEGSECIT
PASLRRMLRRLGESKSIKDCKAMIRAFDLNGDGVLSFDEFSVMMR*
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