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Properties
| Property Name | Value |
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| Note | Putative disease resistance protein RGA3 |
| Model evidence | Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns |
| Product | putative disease resistance protein RGA3, transcript variant X2 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| CDS-auto397689 | auto397689 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc08v2_t006710.2 ID=Tc08v2_t006710.2|Name=Tc08v2_t006710.2|organism=Theobroma cacao|type=mRNA|length=3540bp
ATGGCGGAGATAGTTCTGTGTCCTTTGCTACAGGTTGTCTTTGAAAAGCT
AGCCTCTCGGTTCTTGAAAGAGATTGCCGGTCGTTGTGGGTTCAAGGATG
AAATCAAGAAGCTTCAACGTGCGTTGCGCGCAATGCAGGCTGTGCTTCAA
GATGCAGAAGAGCGGCAAGCTACTGATAAAAATTTGAAGTTGTGGTTAAG
CGAGCTTAAAGAGGTAGCTTTTGATGCCGATGACTTGCTTGAAGAGTTTG
GTCCGGAGGCTATGCTGCAAGAAAACGACAATAGCTTGACGGAGCAGGTG
AGCAACATTGTTCCCTCTTTGAGACCTTTTATGACATACCTTACAAGGTT
TCCCGAATTAAAACAGATTAGGGAGAGACTTGATGTATTATTGGAAGAGA
GGTCTAGCTTCAAGCTCAAGAAAAGAGATGCTGATGAGAAGATTAAAAAT
CTACAAAAACGAGAAACTGGTTCTTTTGTGATTGAATCTGAAGTTATCGG
GAGGGAAGAAGATAAAGAAAATATAGTAGAGATGTTACTGTCAACTACTG
AGAGAAGAGCCAACGAGGTTGTCTCAGTTATTCCCCTAGTGGGTTTGGGG
GGCCTTGGCAAAACCACACTTGCTCAGCTAGTCTATAATGATGAAAGGGT
GATGAGGAATTTTGAACTGAGGATGTGGGTATGTGTTAATGATGACTTTG
ATGTGAGAAAGATTCTTAACTTGATGATAGAATCTGCAACCAGGAGAAGA
TGTGATGATCTCTTGGGGATGGATGTTCTTCAGTCTCAACTACGAGACCT
ATTAGTCAGGAGAAGATATTTGCTTGTATTAGATGATGTATGGAACGAAG
ATGCGGATGAATGGGAGAAGCTTAAAATTTTGCTGAAGTTTGGTGCAGAG
GGAAGCAAAGTCATTGTCACAACAAGAAGTGCGAAGGTTGCAACAATCAT
GGGCACAGTGTCTTCTCACCATTTGAAGGGTCTGTCTCATGATGACTGTT
GGGCTTTGTTCAAGCAACGCGCCTTTGCACATGACCAAGAGGACTACCCA
GACCTGTTGCCAATCGGGAAACAAATAGTGAAAAAATGTGGGGGAGTTCC
TTTAGCAGCAAAGACACTTGGTAGTTTAATGCGCTTCAAAAGAGAGCCAG
AGGAGTGGCTATCTGTGCAGGAGAATGAGCTTTGGAATGTTTGTGAAGAG
GAAACGGGGATATTACCAGCCCTAAAGTTGAGTTATAGCCATTTGCCATC
ACATCTGAAAGGATGCTTTATGTACTGCTCAATCTTTCCAAAGAATTATG
TTATCAAGAAAGAAAAGTTAATCCATCTTTGGATTGCGGAAGGCTTAATT
GAATCATGTGAATACCCCATGAGAACAGTTACAACACGTGAAGAAAGAAA
ATCTCTCGAGAACGTTGGGAGCAATTATTTTAATGACTTAATGTGGACTC
TTTTCTTTGAAGAGGTGAAGAAAAACAGTGATGGTGATGTAATAGAGTGC
AAAATGCATGATCTTGTTCACGATCTTGCAAAATCTGTTGCTGGAGAAGA
GTTTTTTATATTTGAACGTGATTGTCTGCCAAAAAATCTGTCTAGGGTTC
GATACATGTCTCTGGTATGCCATTCTGAATCATGTACTATTCCAGAAGCC
TTGTATGAAGCGAAGAAGTTACGAACTCTTATTTTTTTGTTTCCTAAAGG
TGGCTCTGGTGAAGTCCCAGCCGACTTGTTCTCACATTTTAGGAACCTAC
GAGTCCTAGATCTGGGTTATAGTGGCATCAAAAGGCTGCAAAGCACGGTT
TCTTGCTTGAAGCATTTGAGGTACCTTGGCCTATCAAATACCTTTGTCGC
AACTTTACCAGAAACCATAAGTAGCCTCTACAACTTGCAGGTGCTAAACC
TTTCAGGTTGCGCTGATTTAACTCGCCTGCCAAGGGACTTAGCGAGAATG
TGCATGCTAAGACATCTGATTATCAATAATTGTGAAAGGTTACCTTGCTT
GCCAGATGACATTGGTGCACTCTTTCTACTTCAGACATTGCCAATCTTTA
TTGTGTCAAACGAGAGTGATGACTTAAGGCAGTTGAAGAGGCTGCGGCTC
AGGGGCGAGCTGACAATCAGAAACTTGGAGAATGTGAAAGAAGAAGTTAA
TGCAGTAATCTCGAAAATGAAATTCCTTCATTCACTGGAGTTGTCATGGG
GAGATGAGCATGATGGGCTGAACTTAACTGTTAGAAATGATTTTGCTTGG
GGATTGAGTGAGAAGGTGCTTGACTGCCTGCAACCACCCGAAAATCTCAA
ACGTTTGTCAATAAAAAGGTACTCCGGAATCCATTTTCCACGATGGATGA
GTACTCTTGCACTTCCTAATTTAACTAAAATAGAGTTGATCAACTGCAAA
AGATGTGAACATCTCCCTTCTTTTGGTAGACTTCCAGTGCTAGAGATTAT
CCACATGCAGGGAATGGAAGCTGTGAAGAATATTGGCAGTGAGTTCTATG
GAGAATACATAAACAGATCGTTTGCATCATTAAAGGAGCTATCCCTCATA
GACTTCCCTAATTTGGAATTCTGGTGGAGCATGAGTGGGGGGGCAGAATT
CCCCTCCCTTGTTAAATTAACCATCAATAAATGTCCAAGGTTGATGAATA
TGCCACAACTTTCATCTCTTAGGCATTTGGACCTGCAGAACTGCCATGAA
ACGATACTAAGGTCAGCAGTAAATGTAACCTCACTTTCTGTCCTAATTAT
TAGTGTTTTCACTGGACAGTTGATTGTATTGGATAACTTGCTTCAGAACA
ATGTTCATCTCATGTCTCTAACTATCAGCTCCTGTCCCAAGCTTCACCGC
ATCCCTCCTAGTTTGGGGAACCTTGTCTCTCTAAAATCATTGACCATTCG
TTGGTGTGAGGAGCTCTTATCTTTGCCACAACAACTGCAAAATCTTACCT
GCTTGCAGTCCCTAGAGATCAGTGAATGTCACAGCCTTTCCACTTTACCC
CAGAGTATAGATAGACTAATTTCCCTCAAATATTTGTCTATTGAGAACTG
CAGTAACCTTAGATCGTTACCAATTGAACTGCAACATCTTGGTTCTCTTG
AACACTTAACGATTATGTACTGTCCACGTCTGGTGTCTTTGCCAACTGAC
TGGCATAACCTTTCCATGCTAAGGAGTCTGTGCCTTTTAAGCTGTCCAGA
GCTATCATCTCTGCCTGAAAGCATTAAACATGTCACTGCACTGCAAAATC
TAGAAATCCATGGTTGTCCTGGTTTAAATGTGTTGCCAGAGTGGGTTGCA
AATCTTTCACTTCTTAGATCTTTGGCGATATCAGATTGTCCTAATATGAC
ATCACTTCCAGAAGGTCTTGAGTGCCTGAGCACCCTTCAGCGTCTTTCTA
TTCAAGAATGTCCAAGGCTTGAACAACATTGCAAGAAAAATATAGGTAAG
GACTGGCCAAAAATAGCTCATATTGCACATGTCTATATCGGATCACCAGA
GCTCAGGAAAGAGAATGTTGCCAGCAGCTCGTTGCGATAA back to topprotein sequence of Tc08v2_p006710.2 >Tc08v2_p006710.2 ID=Tc08v2_p006710.2|Name=Tc08v2_p006710.2|organism=Theobroma cacao|type=polypeptide|length=1180bp
MAEIVLCPLLQVVFEKLASRFLKEIAGRCGFKDEIKKLQRALRAMQAVLQ
DAEERQATDKNLKLWLSELKEVAFDADDLLEEFGPEAMLQENDNSLTEQV
SNIVPSLRPFMTYLTRFPELKQIRERLDVLLEERSSFKLKKRDADEKIKN
LQKRETGSFVIESEVIGREEDKENIVEMLLSTTERRANEVVSVIPLVGLG
GLGKTTLAQLVYNDERVMRNFELRMWVCVNDDFDVRKILNLMIESATRRR
CDDLLGMDVLQSQLRDLLVRRRYLLVLDDVWNEDADEWEKLKILLKFGAE
GSKVIVTTRSAKVATIMGTVSSHHLKGLSHDDCWALFKQRAFAHDQEDYP
DLLPIGKQIVKKCGGVPLAAKTLGSLMRFKREPEEWLSVQENELWNVCEE
ETGILPALKLSYSHLPSHLKGCFMYCSIFPKNYVIKKEKLIHLWIAEGLI
ESCEYPMRTVTTREERKSLENVGSNYFNDLMWTLFFEEVKKNSDGDVIEC
KMHDLVHDLAKSVAGEEFFIFERDCLPKNLSRVRYMSLVCHSESCTIPEA
LYEAKKLRTLIFLFPKGGSGEVPADLFSHFRNLRVLDLGYSGIKRLQSTV
SCLKHLRYLGLSNTFVATLPETISSLYNLQVLNLSGCADLTRLPRDLARM
CMLRHLIINNCERLPCLPDDIGALFLLQTLPIFIVSNESDDLRQLKRLRL
RGELTIRNLENVKEEVNAVISKMKFLHSLELSWGDEHDGLNLTVRNDFAW
GLSEKVLDCLQPPENLKRLSIKRYSGIHFPRWMSTLALPNLTKIELINCK
RCEHLPSFGRLPVLEIIHMQGMEAVKNIGSEFYGEYINRSFASLKELSLI
DFPNLEFWWSMSGGAEFPSLVKLTINKCPRLMNMPQLSSLRHLDLQNCHE
TILRSAVNVTSLSVLIISVFTGQLIVLDNLLQNNVHLMSLTISSCPKLHR
IPPSLGNLVSLKSLTIRWCEELLSLPQQLQNLTCLQSLEISECHSLSTLP
QSIDRLISLKYLSIENCSNLRSLPIELQHLGSLEHLTIMYCPRLVSLPTD
WHNLSMLRSLCLLSCPELSSLPESIKHVTALQNLEIHGCPGLNVLPEWVA
NLSLLRSLAISDCPNMTSLPEGLECLSTLQRLSIQECPRLEQHCKKNIGK
DWPKIAHIAHVYIGSPELRKENVASSSLR* back to top
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