Tc08v2_t006320.1

Overview
NameTc08v2_t006320.1
Unique NameTc08v2_t006320.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length465
Properties
Property NameValue
NoteUbiquitin-conjugating enzyme E2 11
Model evidenceSupporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productubiquitin-conjugating enzyme E2 11
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591828
GenbankXM_018125638.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g006320Tc08v2_g006320Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p006320.1Tc08v2_p006320.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto396571auto396571Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto396572auto396572Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t006320.1 ID=Tc08v2_t006320.1|Name=Tc08v2_t006320.1|organism=Theobroma cacao|type=mRNA|length=465bp
ATGTCGGCGAGAACTAAGCGGATACAAAAGGAGTGGGCAAATGTTCAAAA
GGATAAGGAGATAAACAATATGTGCAGTGTTGGTCTAGTTGGGAACAACC
TTGACGAGTGGCAAGCCACGATCTTTGGCCAACCTGGTACTCCTTACGAA
GGGGGTTTATTCAATTTATCCATTGTCTTGCCAAGCAATTACCCATTTGC
ACCACCCAAGGTTACCTTCAAAACTAAGATTTATCACCCCAACATTAATG
AACAGGGTAGCATTTGTCTTGATATTCTTAAATTCAAAGATAAGTGGACT
CCGGCATATGAAGTAAGGGCTGTGATTATAGCAATATGCTCGCTGATGAA
TGATCCAAACCCAGATGATCCGCTCGTGCCTAAGATTGGTGCTGAGTACA
AGAATAACCGGTCCAGCTTCGAGGCTACTGCTCGCCAATGGACAATGCAG
TTTGCTCTACCTTAG
back to top

protein sequence of Tc08v2_p006320.1

>Tc08v2_p006320.1 ID=Tc08v2_p006320.1|Name=Tc08v2_p006320.1|organism=Theobroma cacao|type=polypeptide|length=155bp
MSARTKRIQKEWANVQKDKEINNMCSVGLVGNNLDEWQATIFGQPGTPYE
GGLFNLSIVLPSNYPFAPPKVTFKTKIYHPNINEQGSICLDILKFKDKWT
PAYEVRAVIIAICSLMNDPNPDDPLVPKIGAEYKNNRSSFEATARQWTMQ
FALP*
back to top