Tc08v2_t004670.1

Overview
NameTc08v2_t004670.1
Unique NameTc08v2_t004670.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1167
Properties
Property NameValue
NoteAlcohol dehydrogenase-like 7
Model evidenceSupporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Productalcohol dehydrogenase-like 7
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591658
GenbankXM_018125320.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g004670Tc08v2_g004670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p004670.1Tc08v2_p004670.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto392086auto392086Theobroma cacaoexon
exon-auto392087auto392087Theobroma cacaoexon
exon-auto392088auto392088Theobroma cacaoexon
exon-auto392089auto392089Theobroma cacaoexon
exon-auto392090auto392090Theobroma cacaoexon
exon-auto392091auto392091Theobroma cacaoexon
exon-auto392092auto392092Theobroma cacaoexon
exon-auto392093auto392093Theobroma cacaoexon
exon-auto392094auto392094Theobroma cacaoexon
exon-auto392095auto392095Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto392096auto392096Theobroma cacaoCDS
CDS-auto392097auto392097Theobroma cacaoCDS
CDS-auto392098auto392098Theobroma cacaoCDS
CDS-auto392099auto392099Theobroma cacaoCDS
CDS-auto392100auto392100Theobroma cacaoCDS
CDS-auto392101auto392101Theobroma cacaoCDS
CDS-auto392102auto392102Theobroma cacaoCDS
CDS-auto392103auto392103Theobroma cacaoCDS
CDS-auto392104auto392104Theobroma cacaoCDS
CDS-auto392105auto392105Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t004670.1 ID=Tc08v2_t004670.1|Name=Tc08v2_t004670.1|organism=Theobroma cacao|type=mRNA|length=1167bp
ATGGATAACGAGAAATTGTCAAGCAAAACCGCTGGGAAACCAATTCGGTG
CAAAGCTGCGGTTTCGCGCGAGCCAGGGGAGCCTCTAGTGATCGAGGAAA
TCATGGTGGCCCCTCCGAGTCCCTACGAAGTACGGATTCGGATAATCTGC
ACCTCTCTCTGTCACAGCGACATCATCTTTTGGAAACTGAAGGTGCCTCC
TGCTTGTTTCCCCAGAATTCTGGGCCACGAGGCCGTCGGGGTGGTGGAGA
GTGTCGGTGAGAATGTAGACGAGGTAGCGGAAGGAGATGTTGTCATCCCA
ACGTTCCTGTCAGATTGTGGAGAATGTGCAGATTGCCGTTCAGAGAAGAG
CAACTTATGTTCAAAATTCCCGTTTAGGGTCCACCCCTGGATGCCTAGAT
ATGACGCCAGCAGATTCACTGATCTTAAGGGAGAGGCTTTATATCATTTT
CTATTCGTTTCGAGTTTCAGCGAGTACACGGTAGTAGATATCACCCATGT
AGTGAAGATTGATCCTGCAATCCCTCCAAACAGGGCATGCCTCTTTGGCT
GTTGTGTATCTACAGGGGTTGGTGCTGCTTGCAAAACGGCAAATGTTGAG
GCAGGATCAACTGTTGCTATTTTTGGGCTGGGATCAATCGGATTAGCGGT
TGCAAAGGGAGCAAGACTATGTGGTGCAAAAAGAATTATAGGAGTGGATA
TAAACCCAGAGAAATTTGAAATTGGGAAAATTTTTGGAGTCACTGAGTTT
ATCAATTCAAAAGACTGTGGGAACAAATCTCTGAGCCAGGTAATCATTGA
GATGACCGGAGGAGGTGCTGATTATTGCTTTGAATGTGTTGGTTTGGGAT
CCTTGGTACAAGAAGCCTATGCAAGCTGCCGTAAGGGTTGGGGCAAGACG
ATTGTTATGGGAGTGGACAAGCCAGGTGCACAGTTGAACTTCAGTTCTTT
TGACGTCCTTCATTCTGGGAAAGTCCTCACTGGATCCTTATTTGGAGGAG
TCAAAGCCAAATCCGACCTTCCAGTTCTGATAAAGCGTTACATGGACAAG
GAATTGCAGCTGGACGAGTTTGTCACTCATGAGGTGAAATTTGAAGACAT
CAACAAAGCCTTTGAATTACTTATAGAAGGGAAGTGCATCCGCTGTGTGA
TATGGATGGATAAATGA
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protein sequence of Tc08v2_p004670.1

>Tc08v2_p004670.1 ID=Tc08v2_p004670.1|Name=Tc08v2_p004670.1|organism=Theobroma cacao|type=polypeptide|length=389bp
MDNEKLSSKTAGKPIRCKAAVSREPGEPLVIEEIMVAPPSPYEVRIRIIC
TSLCHSDIIFWKLKVPPACFPRILGHEAVGVVESVGENVDEVAEGDVVIP
TFLSDCGECADCRSEKSNLCSKFPFRVHPWMPRYDASRFTDLKGEALYHF
LFVSSFSEYTVVDITHVVKIDPAIPPNRACLFGCCVSTGVGAACKTANVE
AGSTVAIFGLGSIGLAVAKGARLCGAKRIIGVDINPEKFEIGKIFGVTEF
INSKDCGNKSLSQVIIEMTGGGADYCFECVGLGSLVQEAYASCRKGWGKT
IVMGVDKPGAQLNFSSFDVLHSGKVLTGSLFGGVKAKSDLPVLIKRYMDK
ELQLDEFVTHEVKFEDINKAFELLIEGKCIRCVIWMDK*
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