Tc08v2_t001770.1

Overview
NameTc08v2_t001770.1
Unique NameTc08v2_t001770.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length999
Properties
Property NameValue
NoteDNA-3-methyladenine glycosylase, putative
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productprobable GMP synthase [glutamine-hydrolyzing]
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591344
GenbankXM_007017405.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g001770Tc08v2_g001770Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p001770.1Tc08v2_p001770.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto385739auto385739Theobroma cacaoexon
exon-auto385740auto385740Theobroma cacaoexon
exon-auto385741auto385741Theobroma cacaoexon
exon-auto385742auto385742Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto385743auto385743Theobroma cacaoCDS
CDS-auto385744auto385744Theobroma cacaoCDS
CDS-auto385745auto385745Theobroma cacaoCDS
CDS-auto385746auto385746Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t001770.1 ID=Tc08v2_t001770.1|Name=Tc08v2_t001770.1|organism=Theobroma cacao|type=mRNA|length=999bp
ATGTCCGTGGCTACTAAGCTTAAGTCATCACCAACACCGGTGACGGAACC
GCGAGCGATTCTCGGTCCGACCGGGAACAGAGTTAGGGTTTCGGACGAGT
CAAAGAGGAAACCCGAAGCTCAAAAAAAGCCACAAAGACCGAAATTTCGA
GTCTCCAAGAGCCCACAGTCCGTTGTCCAGAGCAACGTCTCCGTCGACAG
TTCATGTTCCTCGGATTCTTCTTCAAGCAATTCCTCCGTCAAAACGGTAA
GCTCTAAGAAAACAGTTAAACGAATCGGAGTGAAGCCGGTGAAAGCCAAA
GTTGCTCCAACAGCTGACGAGGTTGTTGCGGAACCTTCTCCGGTGTTACC
TGAACCGTTAAAGCGATGTGATTGGATCACTCCATTTTCTGACCCGCTTT
ATACTTCTTTGCATGACAAAGAATGGGGTGTTCCAGTTCATGATGACAGG
AAGCTGTTTGAGCTGCTGGTCTTTTCACAAGCCTTAGCTGAACTCAGCTG
GCCGACAATTCTCAATAAGAGAGACATATTCAGGAAGCTTTTTGACAATT
TTGATCCATCAACAATTGCTCAGTTTACTGAGAAGAAGTTGCTGTCATTG
AAAGTTAATGGTAGCCTATTGCTTTCTGAACCAAAGCTCCGTGCAGTAGT
GGAGAATGCTAAACAGATGCTTAAGGTTCAGCAGGAGTTTGGTTCCTTCA
GCAGCTATTGCTGGGGATTTGTAAACCACAAGCCAATTAGAAATGGGTTC
CGTTATGTGCGTCAAGTACCAGTTAAGACCCCAAAAGCTGAACTCATTAG
CAAGGATATGATGCAGAGAGGCTTCCGTTGTGTGGGACCGACTGTTGTTT
ATTCATTCATGCAAGTGGCAGGAATTGTTAACGATCATCTTGTGACTTGC
TTCAGATACCAAGAATGCAATGCAAATGTCAAAAAGGATATAAAACCAGA
AATAGAAAGGCTAACCAAAGATGTGGAGAACACGCGCTTATCTTGCTAG
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protein sequence of Tc08v2_p001770.1

>Tc08v2_p001770.1 ID=Tc08v2_p001770.1|Name=Tc08v2_p001770.1|organism=Theobroma cacao|type=polypeptide|length=333bp
MSVATKLKSSPTPVTEPRAILGPTGNRVRVSDESKRKPEAQKKPQRPKFR
VSKSPQSVVQSNVSVDSSCSSDSSSSNSSVKTVSSKKTVKRIGVKPVKAK
VAPTADEVVAEPSPVLPEPLKRCDWITPFSDPLYTSLHDKEWGVPVHDDR
KLFELLVFSQALAELSWPTILNKRDIFRKLFDNFDPSTIAQFTEKKLLSL
KVNGSLLLSEPKLRAVVENAKQMLKVQQEFGSFSSYCWGFVNHKPIRNGF
RYVRQVPVKTPKAELISKDMMQRGFRCVGPTVVYSFMQVAGIVNDHLVTC
FRYQECNANVKKDIKPEIERLTKDVENTRLSC*
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