Tc08v2_t000770.1

Overview
NameTc08v2_t000770.1
Unique NameTc08v2_t000770.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1014
Properties
Property NameValue
NoteNAD(P)-binding Rossmann-fold superfamily protein
Model evidenceSupporting evidence includes similarity to: 10 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Productputative dihydroflavonol-4-reductase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591229
GenbankXM_007017226.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g000770Tc08v2_g000770Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p000770.1Tc08v2_p000770.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto383695auto383695Theobroma cacaoexon
exon-auto383696auto383696Theobroma cacaoexon
exon-auto383697auto383697Theobroma cacaoexon
exon-auto383698auto383698Theobroma cacaoexon
exon-auto383699auto383699Theobroma cacaoexon
exon-auto383700auto383700Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto383701auto383701Theobroma cacaoCDS
CDS-auto383702auto383702Theobroma cacaoCDS
CDS-auto383703auto383703Theobroma cacaoCDS
CDS-auto383704auto383704Theobroma cacaoCDS
CDS-auto383705auto383705Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t000770.1 ID=Tc08v2_t000770.1|Name=Tc08v2_t000770.1|organism=Theobroma cacao|type=mRNA|length=1014bp
ATGAAGATACTGGTGACTGGCGCGTCGGGTTATCTCGGAGGAAGGCTGTG
CGACGCTCTGGTGAGCCGCGGCCACTCCGTCCGGGCCTTTGTCCGTCGTA
CCAGCGACCTCTCTGGGCTTCCTTCACCCACCCATGGCTCCTCTTTGGAA
CTAGCATACGGCGACGTCACCGATTACCGATCCCTTCTAGATGCCTGCTC
CGGCTGCGACGTCATATTCCACGCTGCTGCCCTCGTCGAATCTTGGGTTC
CCGATCCTTCTAGATTCTTCTCCGTCAACGTTGGTGGTCTGAAGAACCTG
CTGCAAGCAGCTAAGGAGACAAAGACGATCAATAAGATCATATATACGTC
GTCGTTCTTCGCTGTTGGTCCTACCGATGGATATATTGCCGATGAGAATC
AAATACATCCGGAGAAGTTCTTCTGCACGGAGTACGAGAAATCAAAGGCG
GCTGCAGATAAGATTGCTCTGCAAGCTGTAGCAGAAGGGATGCCCATTGT
TCCGGTTTATCCTGGTGTAATTTATGGTCCTGGCAAGCTTACCACGGGCA
ATGTTGTTGCTCAATTAATAATTGAGCGGTTTAATTGGAGATTACCTGGT
TACATTGGCAGGGGAAATGATAAGTTTTCTTTCAGTCATGTCGAAGATGT
AGTAGAGGGTCATATTGCAGCAATGGAGAAGGGTCGACCAGGGGAAAGAT
ATTTACTCACAGGAGATAATGCATCATTCAGGCTTTGTTTTGATATAGCT
GCCATTATCACTGAAACTGGTAGGCCTAAATTCAACATCCCTCTAGGTCT
GATTGAAGCTTATGGATGGGTTTCTGTTCTTATTGCTCGAATTACAGGGA
AGCTTCCTCTCATTAGTCCCCCGACTGTGAATGTTTTAAGACATCAGTGG
GCATATACTTGTGACAAGGCGAAATTGGAGTTGGATTACAGGCCTAGAAG
CTTGAAAGATGGGCTAGAAGAAATGCTCCCCTGGTTGAAGAGCTTGGGCA
AGATAAGATACTAA
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protein sequence of Tc08v2_p000770.1

>Tc08v2_p000770.1 ID=Tc08v2_p000770.1|Name=Tc08v2_p000770.1|organism=Theobroma cacao|type=polypeptide|length=338bp
MKILVTGASGYLGGRLCDALVSRGHSVRAFVRRTSDLSGLPSPTHGSSLE
LAYGDVTDYRSLLDACSGCDVIFHAAALVESWVPDPSRFFSVNVGGLKNL
LQAAKETKTINKIIYTSSFFAVGPTDGYIADENQIHPEKFFCTEYEKSKA
AADKIALQAVAEGMPIVPVYPGVIYGPGKLTTGNVVAQLIIERFNWRLPG
YIGRGNDKFSFSHVEDVVEGHIAAMEKGRPGERYLLTGDNASFRLCFDIA
AIITETGRPKFNIPLGLIEAYGWVSVLIARITGKLPLISPPTVNVLRHQW
AYTCDKAKLELDYRPRSLKDGLEEMLPWLKSLGKIRY*
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