Tc07v2_t014820.1

Overview
NameTc07v2_t014820.1
Unique NameTc07v2_t014820.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length288
Properties
Property NameValue
NoteUncharacterized protein
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Productuncharacterized LOC18507237, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18507237
GenbankXM_018124550.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g014820Tc07v2_g014820Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p014820.1Tc07v2_p014820.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto380663auto380663Theobroma cacaoexon
exon-auto380664auto380664Theobroma cacaoexon
exon-auto380665auto380665Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto380666auto380666Theobroma cacaoCDS
CDS-auto380667auto380667Theobroma cacaoCDS
CDS-auto380668auto380668Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t014820.1 ID=Tc07v2_t014820.1|Name=Tc07v2_t014820.1|organism=Theobroma cacao|type=mRNA|length=288bp
ATGGAAACAAGTAGAAGACGCTTCATTTCGGGTCGAAAGGGAAAGAGTTC
AGCAAAATACATGAGGAGGAGATTTAAGAAGTTGAAAGAAGAGATGAAAG
AGATCAGCAAAGAGCAGCAAAGCATTAGGGAAGGGCAAAGGCAAGTTGCA
GCAAAATTCAAGGCAATCGAAGAAGAATGTGAGCAGCTGAGGAAGGAGAC
TCACCAGATTATTCGACAAAGTGCCAACACTCAAATCCGCCTCAGCCTGA
TGTTCAATATCCTCAAGGCACGAGAACAAGTGAAATAG
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protein sequence of Tc07v2_p014820.1

>Tc07v2_p014820.1 ID=Tc07v2_p014820.1|Name=Tc07v2_p014820.1|organism=Theobroma cacao|type=polypeptide|length=96bp
METSRRRFISGRKGKSSAKYMRRRFKKLKEEMKEISKEQQSIREGQRQVA
AKFKAIEEECEQLRKETHQIIRQSANTQIRLSLMFNILKAREQVK*
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