Tc07v2_t014440.1

Overview
NameTc07v2_t014440.1
Unique NameTc07v2_t014440.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1788
Properties
Property NameValue
NoteProbable terpene synthase 6
Model evidenceSupporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productprobable terpene synthase 6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594730
GenbankXM_018124617.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g014440Tc07v2_g014440Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p014440.1Tc07v2_p014440.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto380135auto380135Theobroma cacaoexon
exon-auto380136auto380136Theobroma cacaoexon
exon-auto380137auto380137Theobroma cacaoexon
exon-auto380138auto380138Theobroma cacaoexon
exon-auto380139auto380139Theobroma cacaoexon
exon-auto380140auto380140Theobroma cacaoexon
exon-auto380141auto380141Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto380142auto380142Theobroma cacaoCDS
CDS-auto380143auto380143Theobroma cacaoCDS
CDS-auto380144auto380144Theobroma cacaoCDS
CDS-auto380145auto380145Theobroma cacaoCDS
CDS-auto380146auto380146Theobroma cacaoCDS
CDS-auto380147auto380147Theobroma cacaoCDS
CDS-auto380148auto380148Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t014440.1 ID=Tc07v2_t014440.1|Name=Tc07v2_t014440.1|organism=Theobroma cacao|type=mRNA|length=1788bp
ATGGCACTCCAAGCCAGTATTTTCACTAAGTCCTGCTTCCACCGAGGCGT
TTATATGCCAACTCTTCCGTCCAAATTTCGGGGGAGACAATGCTTGGCTT
CCACAAACTCAATGGCTGCAGCAGCCCTGCAAGGCTCTCCGCTGTCGGCA
AACACTCACCAAGAAGTCTTTCGTCCTTTGGCAGACTTCCCCCCGGATAT
ATGGGGCGACTGTTTCATGTCTCTCTCGCTCGATAACTTGGAATTTGAAT
CACTCTGTAGACAAGTAGAGGTGTTGAAAAAGAAGGTGAAGGGCATGTTA
TCGGCTCCGAGTGACCAAGTAGAAAAAATCCTCTTGATCAACTCTCTATG
CCGCCTTGGATTATCGTACCACTTTGAGAATGAGATTGAAGAGCAATTAA
GTTACCTTTTTGTTTCATTATCTAAACATATGGATGATAAAGACTATGAC
TTGGAAACAGTTGCAGCGATATTTCAAGTTTTCAGGCTACATGGTTATCG
AATGCGCTGTGATGTGTTTAACAAGTTTAAGGAGGGTGATGGTGAGTTCA
AGGAAGTGTTAGCTAGTGATGTCAAGGGCATCCTAAGCTTGTATGAAGCT
AGCCAGTTCAGAATAAATGGCGAGAAAATTTTAGATGAAGCCCTTGCTTT
CACAACGAAGCACTTAGAGTCCTTGACAGACCAATCAAGTCCCCATCTTA
GAGAATACATAGGAAACGCTTTGAACCGACCTTATCACAAAGGCATGCCG
AGAGTGGAAGCAAGGCAATATATAACTTTCTATGAAAAAGAAGAATCGCC
CAATGAAACATTGCTCAAGCTCGCAAAATATGATTTTAACCGAGTCCAAT
TTCTACACCAGCAAGAATTAAGCATCCTTTCGAGTTGGTCCAAAGACTTG
AACATAGCATCACAACTTTCTTACGCCAGAAACAGAACGGTGGAGATCTT
TTTTTGGACAGTTGGATTTTATTTCGAGCCACGTTATGCACTTGCCCGAA
ACATATTCACTAAGCTGCTGATCATCTTAGGATTTATAGATGATACCTAT
GACGCATATGGTACCTTCGAAGAACTCCAATGTTTCACAGATGCAATACA
AAGGTGGGATATTAGTGCCCTTGATCAGCTGCCCGCAGATTATTTGAAAT
TTCTTTATGGGGCACTCCTTAATGTTTATGATGAAGTGGATAGAATGGTG
AGCATGGATGGGAGATGTTACAGCATGTCTTTTACCAAAGATGAGTTGAA
GAAAATTGTTATTTCCTACCTGGTTGAAGCTCAGTGGACGCATGAAGGTT
ATATGCCAACATTCGATGAGTATTTGGACATTGCATTACATTCAAGTGCA
GCCATTCTAGTGATTGCTGAAGTCTTGGTCGGAATGGAAGAAGCAGATGC
CAATGTTTTTGAATGGTTGAGACAAGGTGACAGTAAATCTCTTGCAGCAA
TAAAAATAATTGGCCGTCTCTATGATGACATCGCAACCAATGAGGATGAG
GAAAAGAGAGGACTAGTTGCTTGTGGAATCAAATGTTATATGAAGCAATA
TGGCGTTTCAAAGGAAGAAGCTATTGAAGAATTTCGAAAAAGACTTGTCA
TTGCTTGGAATGAGCTTAATGAAGATCATATGAGGCCAACGACTGTCCCA
ATGGAAATCCTTAATCGTGTTCGTAACATTGCATGTGTAATAGATCTTAC
ATACAAGGATGAGGATGGATTTACCATGTCTGAGAAAATTTTGAAAGACC
ACATTACCAAAGTGCTCATTGAGCCCATTCCTATTTGA
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protein sequence of Tc07v2_p014440.1

>Tc07v2_p014440.1 ID=Tc07v2_p014440.1|Name=Tc07v2_p014440.1|organism=Theobroma cacao|type=polypeptide|length=596bp
MALQASIFTKSCFHRGVYMPTLPSKFRGRQCLASTNSMAAAALQGSPLSA
NTHQEVFRPLADFPPDIWGDCFMSLSLDNLEFESLCRQVEVLKKKVKGML
SAPSDQVEKILLINSLCRLGLSYHFENEIEEQLSYLFVSLSKHMDDKDYD
LETVAAIFQVFRLHGYRMRCDVFNKFKEGDGEFKEVLASDVKGILSLYEA
SQFRINGEKILDEALAFTTKHLESLTDQSSPHLREYIGNALNRPYHKGMP
RVEARQYITFYEKEESPNETLLKLAKYDFNRVQFLHQQELSILSSWSKDL
NIASQLSYARNRTVEIFFWTVGFYFEPRYALARNIFTKLLIILGFIDDTY
DAYGTFEELQCFTDAIQRWDISALDQLPADYLKFLYGALLNVYDEVDRMV
SMDGRCYSMSFTKDELKKIVISYLVEAQWTHEGYMPTFDEYLDIALHSSA
AILVIAEVLVGMEEADANVFEWLRQGDSKSLAAIKIIGRLYDDIATNEDE
EKRGLVACGIKCYMKQYGVSKEEAIEEFRKRLVIAWNELNEDHMRPTTVP
MEILNRVRNIACVIDLTYKDEDGFTMSEKILKDHITKVLIEPIPI*
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