Tc07v2_t014380.1

Overview
NameTc07v2_t014380.1
Unique NameTc07v2_t014380.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1635
Properties
Property NameValue
NotePutative Probable terpene synthase 9
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Productprobable terpene synthase 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594721
GenbankXM_018124406.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g014380Tc07v2_g014380Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p014380.1Tc07v2_p014380.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto380079auto380079Theobroma cacaoexon
exon-auto380080auto380080Theobroma cacaoexon
exon-auto380081auto380081Theobroma cacaoexon
exon-auto380082auto380082Theobroma cacaoexon
exon-auto380083auto380083Theobroma cacaoexon
exon-auto380084auto380084Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto380085auto380085Theobroma cacaoCDS
CDS-auto380086auto380086Theobroma cacaoCDS
CDS-auto380087auto380087Theobroma cacaoCDS
CDS-auto380088auto380088Theobroma cacaoCDS
CDS-auto380089auto380089Theobroma cacaoCDS
CDS-auto380090auto380090Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t014380.1 ID=Tc07v2_t014380.1|Name=Tc07v2_t014380.1|organism=Theobroma cacao|type=mRNA|length=1635bp
ATGCCCAAGCTTCATCACCTTGGAATTACTCTGTGTTTAACCTGCACCAC
TTTATTTTGGCTAACCTTGCAGTTCGAGAGCTATGGCACTCGTCTTAAGG
AACTTAAGCAAGGTGCTAGGGATTTACTTGCTAACATGAAAGAACCACGA
GACCAACTGGATCTGATCAACACACTGCAACGCTTAGGAGTGGCTTACCA
CTTTGAAAAGGATATCAAGGATATTCTTGCTAAACTTGTTGATGCTAACA
TTGCCACTGATCTTTACACTGTTGCCTTGCAATTTAGACTAATACGTCAA
ATTGGTTTCTTCATTAGTACAGATGTGTTTAATAAGTTCATGGAGAGAGA
TGGAAAATTCATGGACAGCTTACGGGAAGATGTTATTGGGCTATTGAGTT
TATACGAAGCTTCGCACCTTGGGATGCCAGAAGAAGATGTTTTTGACGAG
GCCCTGAATTTTAGTACAAAACATCTGTTAGTGTTAAGAAAGAAGATGGA
TGGAAATAAAGCTGAGCAAATACAACAATCACTGGAATATCCACTGCACT
GGAGGATGCCCTGGACAGAAGCACGAGATTTCATTGCTATCTACCAATAT
GATGCTAAGATGAATTCGGTTTTGCTCGAGCTTGCCAAGTTGAACTTCAA
TATCATGCAATCTGTTTATCTGAAGGAGCTGCAGGAACTAGTGGAGTGGT
GGAAGGACTTGAACTTTAAGGAAAGGCTACCTTTTGCTCGGGATAGGCTA
CTTGAGTGTTATTTTTGGGCACTGGGGAGTTGCCCACCGGGGCCCCAATT
TCCCATATTGAGGAGGAACCTCGGGAAATTCGGATCCTTGGCAACACCAT
TGGATGACATATTCGACGTATATGGCTCACTTGATGAGCTTGAGAAGTAC
ACGGATGCAGTACATACATGGGATCTTAATAAGGCAACGGAGGAACTTCC
AGAGTACATGAAAGTATACTTCTCAGCCATGTACAACCATGTTAGTGAAA
TGGTCCAAGATGCCTTGAAAGATAATGGCATGGATATTTTACCCTATATT
AAGGAACAGTGGTTGTGTTATGTTAGAGGATATCTCAAGGAAGCACGATG
GTTTCACAGCGGATACACTCCAACTGCGGATGAATATCTTGAGAATGGCT
GGGTCTCGATTGGTATACCTATATCCATTGTCTATGGCGTTTTTGGAATG
GCAGGGCACTCTATAAATGAATATTTGTCAGAATTTGTGGAGCATTGGTC
TTCCTCTGACTTAGTTAGGTTGCCTGGCTACATTGGTCAACTCATTGATG
ATCTAAACACTGCCGAGGTTGAAATGAAAAGGGGAGAATCAATGAATTTC
ATCCATTTTTACGTGACCCAAGATGGTGTTTCAGAGGAAGAAGCACGTGA
TCATGTGAAAGGCTTGATAAGAAATTTATGGAAAAAATTGAACAAAGCAA
TAGTTAAAGATTCTGTTCGTGCAGCCGACATTGTTAAAGTTGCCGTCGAA
ATGACACGATGTGTTCATCGGATCTACCATTATGGCGATTGGTTTGGCAT
TCAAAGCAAAGAAAATCAAGATTGTGTCAAGTCAATCCTTGAGCCCATTC
CGATGGAACAATGTGATCAAGCTTTACTGAAATAA
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protein sequence of Tc07v2_p014380.1

>Tc07v2_p014380.1 ID=Tc07v2_p014380.1|Name=Tc07v2_p014380.1|organism=Theobroma cacao|type=polypeptide|length=545bp
MPKLHHLGITLCLTCTTLFWLTLQFESYGTRLKELKQGARDLLANMKEPR
DQLDLINTLQRLGVAYHFEKDIKDILAKLVDANIATDLYTVALQFRLIRQ
IGFFISTDVFNKFMERDGKFMDSLREDVIGLLSLYEASHLGMPEEDVFDE
ALNFSTKHLLVLRKKMDGNKAEQIQQSLEYPLHWRMPWTEARDFIAIYQY
DAKMNSVLLELAKLNFNIMQSVYLKELQELVEWWKDLNFKERLPFARDRL
LECYFWALGSCPPGPQFPILRRNLGKFGSLATPLDDIFDVYGSLDELEKY
TDAVHTWDLNKATEELPEYMKVYFSAMYNHVSEMVQDALKDNGMDILPYI
KEQWLCYVRGYLKEARWFHSGYTPTADEYLENGWVSIGIPISIVYGVFGM
AGHSINEYLSEFVEHWSSSDLVRLPGYIGQLIDDLNTAEVEMKRGESMNF
IHFYVTQDGVSEEEARDHVKGLIRNLWKKLNKAIVKDSVRAADIVKVAVE
MTRCVHRIYHYGDWFGIQSKENQDCVKSILEPIPMEQCDQALLK*
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