Tc07v2_t014360.1

Overview
NameTc07v2_t014360.1
Unique NameTc07v2_t014360.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length345
Properties
Property NameValue
NotePutative (-)-germacrene D synthase
Model evidenceSupporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Product(-)-germacrene D synthase-like
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662815
GenbankXM_018124405.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g014360Tc07v2_g014360Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p014360.1Tc07v2_p014360.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto380055auto380055Theobroma cacaoexon
exon-auto380056auto380056Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto380057auto380057Theobroma cacaoCDS
CDS-auto380058auto380058Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t014360.1 ID=Tc07v2_t014360.1|Name=Tc07v2_t014360.1|organism=Theobroma cacao|type=mRNA|length=345bp
ATGCCAGAAGAAGATGTTTTAGACGAGGCCCTGAATTTTAGTACAAAACA
TCTGTTAGTGTTAAGGAAGAAGATGGATGGAAATAAAGCTGAGCAAATAC
AACAATCACTGGAATATCCACTGCACTGGAGGATGCCCTGGACAGAAGCA
CGAGATTTCATTGCTATCTACCAATATGATGCTAAGATGAATTCGGTTTT
GCTCGAGCTTGCCAAGTTGAACTTCAATATCATGCAATCTGTTTATCTGA
AGGAGCTGCAGGAACTAGTGGAGTGGTGGGAGGACTTGAACTATAAGGAA
AGGCTACCTTTTGCTCGGGATAGGCTACTTGAGTGTTATTTTTAG
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protein sequence of Tc07v2_p014360.1

>Tc07v2_p014360.1 ID=Tc07v2_p014360.1|Name=Tc07v2_p014360.1|organism=Theobroma cacao|type=polypeptide|length=115bp
MPEEDVLDEALNFSTKHLLVLRKKMDGNKAEQIQQSLEYPLHWRMPWTEA
RDFIAIYQYDAKMNSVLLELAKLNFNIMQSVYLKELQELVEWWEDLNYKE
RLPFARDRLLECYF*
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