Tc07v2_t014340.1

Overview
NameTc07v2_t014340.1
Unique NameTc07v2_t014340.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length882
Properties
Property NameValue
NoteGag-pol polyprotein-like protein
Model evidenceSupporting evidence includes similarity to: 1 Protein
Productuncharacterized LOC108662813
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662813
GenbankXM_018124403.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g014340Tc07v2_g014340Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p014340.1Tc07v2_p014340.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto380041auto380041Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto380042auto380042Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t014340.1 ID=Tc07v2_t014340.1|Name=Tc07v2_t014340.1|organism=Theobroma cacao|type=mRNA|length=882bp
ATGGAAAAGAAATTGCAAAAAAAGTTTAGAGCTCTTTCATTCATTCAGTC
TGCTATCTTTGAGGATATTTTCAACAGAATCATGGAATGTGAAACAGCTA
AGGCAACTTGGACAAAGCTACATGAAGAATATGTTGGGACCTCTAGAACA
AGGCATATGCAGGCACAGAACTTGAGAAGGTACTTTGACATGATGCGAAT
GAAGGAAAGTCAGTCTTTAAAAGAATATATAGACCAAATTCTTAAGCTTG
CTAACCTAATAAAGTTGTTTGGTGAAGAGCTTAAAGAAGTTCGAGTAGCT
AAGAAGATTATCAACAATGTACCAAGGAAGTTTGAACCTACAATAGCATC
CCTATTACAATCAAAGGACCTGTCTGACATTTCAATTACAAAAATTGTCA
ATGCCTTGCAAGCTGCAGAACTGAGAATATCAGCAAGAGATGAAGCTTTT
GGGGAGAAAGCCTTTCTTGCTAAAGGAAAAGGCAAAGCCAAAGCTGAGGC
TTTTACCAAGAAAAATTACAAAGACAAAAATAAGAAGATTACTCAATCTG
GTCAATCCTCAAACAAGAAAAATAAGTTCAAGCCATGTTCCTACTGCAAG
AAAAGGAATCATATTGATGATTACTACTGGTTTAGGCCAGATGCAAAATG
TAAAATATGTAGTCAATTAGGACACACTGATAAATTATGCAAGAACAGAA
CAATTGAAGATAAACCTGCACAAACAAATGAAAGCTCAGAATTAGCTGAA
GAAGTGTTGTTCATGGCTCAGTCAGATTTTGCAAGTGACTTTGGTAACTG
TGAATGGCTCCTTGATAGTGGCAGCTCACGGCATATTGTACTTTTTGAAG
CTATGTTTGTTGATCTTGATAAGAACCATTGA
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protein sequence of Tc07v2_p014340.1

>Tc07v2_p014340.1 ID=Tc07v2_p014340.1|Name=Tc07v2_p014340.1|organism=Theobroma cacao|type=polypeptide|length=294bp
MEKKLQKKFRALSFIQSAIFEDIFNRIMECETAKATWTKLHEEYVGTSRT
RHMQAQNLRRYFDMMRMKESQSLKEYIDQILKLANLIKLFGEELKEVRVA
KKIINNVPRKFEPTIASLLQSKDLSDISITKIVNALQAAELRISARDEAF
GEKAFLAKGKGKAKAEAFTKKNYKDKNKKITQSGQSSNKKNKFKPCSYCK
KRNHIDDYYWFRPDAKCKICSQLGHTDKLCKNRTIEDKPAQTNESSELAE
EVLFMAQSDFASDFGNCEWLLDSGSSRHIVLFEAMFVDLDKNH*
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