Tc07v2_t013860.3

Overview
NameTc07v2_t013860.3
Unique NameTc07v2_t013860.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length957
Properties
Property NameValue
NoteThiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Productthiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594871
GenbankXM_018125135.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g013860Tc07v2_g013860Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p013860.3Tc07v2_p013860.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto379549auto379549Theobroma cacaoexon
exon-auto379550auto379550Theobroma cacaoexon
exon-auto379551auto379551Theobroma cacaoexon
exon-auto379552auto379552Theobroma cacaoexon
exon-auto379553auto379553Theobroma cacaoexon
exon-auto379554auto379554Theobroma cacaoexon
exon-auto379555auto379555Theobroma cacaoexon
exon-auto379556auto379556Theobroma cacaoexon
exon-auto379557auto379557Theobroma cacaoexon
exon-auto379558auto379558Theobroma cacaoexon
exon-auto379559auto379559Theobroma cacaoexon
exon-auto379560auto379560Theobroma cacaoexon
exon-auto379561auto379561Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto379562auto379562Theobroma cacaoCDS
CDS-auto379563auto379563Theobroma cacaoCDS
CDS-auto379564auto379564Theobroma cacaoCDS
CDS-auto379565auto379565Theobroma cacaoCDS
CDS-auto379566auto379566Theobroma cacaoCDS
CDS-auto379567auto379567Theobroma cacaoCDS
CDS-auto379568auto379568Theobroma cacaoCDS
CDS-auto379569auto379569Theobroma cacaoCDS
CDS-auto379570auto379570Theobroma cacaoCDS
CDS-auto379571auto379571Theobroma cacaoCDS
CDS-auto379572auto379572Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t013860.3 ID=Tc07v2_t013860.3|Name=Tc07v2_t013860.3|organism=Theobroma cacao|type=mRNA|length=957bp
ATGGCCTCAGCAATTGACAGAAGAATTAATTTTTCTACGCAATCTCTATC
CACAAATGATACGGTTGTTTCTGTTGATTGGCTCCATGCTAATCTAAGGG
AGCCTGATATGAAGGTACTGGATGCATCCTGGTACATGCCAGATGAGCAG
AGGAATCCTATTCAAGAGTATCAGGTTGCTCACATTCCTGGTGCTCTTTT
CTTTGATGTTGATGGAATAGCGGATCGAACTACAAAGTTGCCACATATGC
TGCCATCTGAGGAAGCCTTTGCTGCTGCGGTGTCTGCTCTTGGCATCCAG
AATAATGATGGACTGGTTGTTTATGATGGAAAGGGAATTTTTAGTGCAGC
ACGTGTCTGGTGGATGTTCCGAGTCTTTGGGCATGACCGAGTATGGGTGT
TAGATGGAGGCCTCCCAAGGTGGCGTGCATCAGGATATGATGTTGAATCT
AGTGCTTCTAGTGATGCTATTTTGAAAGCCAGTGCTGCCAGTGAGGCTAT
AGAGAAAGTCTATCAGGGACAAACAGCTGGACCGGTCACATTTCAGACAA
AATTTCAGCCACATCTTGTCTGGACACTCGATCAGGTTAGAAGAAACATT
GAGGAAAAAACTCACCAACATATAGATGCCCGCTCCAAGCCCCGATTTGA
TGGTGCTGCACCAGAACCTCGCAAGGGAATAAGAAGTGGCCATGTCCCTG
GCAGCAAATGTATTCCTTTTCCCCATATGTTGGATGCTTCACAGACACTT
TTACCCGCTGATGAACTTAAGAAACGATATCAGGAAGAAGGCATCTCATT
GGAAGGCCCTGTTGTTACTTCTTGTGGCACTGGTGTAACTGCTTGTGTTC
TGGCATTGGGCCTCCATCGACTTGGGAAGTCTGATGTTGCTGTGTATGAT
GGATCTTGGACCGAATGGGGTGCACAATCAGACACACCTGTTGACACTTC
ACTGTAA
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protein sequence of Tc07v2_p013860.3

>Tc07v2_p013860.3 ID=Tc07v2_p013860.3|Name=Tc07v2_p013860.3|organism=Theobroma cacao|type=polypeptide|length=319bp
MASAIDRRINFSTQSLSTNDTVVSVDWLHANLREPDMKVLDASWYMPDEQ
RNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIQ
NNDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES
SASSDAILKASAASEAIEKVYQGQTAGPVTFQTKFQPHLVWTLDQVRRNI
EEKTHQHIDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFPHMLDASQTL
LPADELKKRYQEEGISLEGPVVTSCGTGVTACVLALGLHRLGKSDVAVYD
GSWTEWGAQSDTPVDTSL*
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