Tc07v2_t013860.2

Overview
NameTc07v2_t013860.2
Unique NameTc07v2_t013860.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1131
Properties
Property NameValue
NoteThiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productthiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594871
GenbankXM_007022535.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g013860Tc07v2_g013860Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p013860.2Tc07v2_p013860.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto379523auto379523Theobroma cacaoexon
exon-auto379524auto379524Theobroma cacaoexon
exon-auto379525auto379525Theobroma cacaoexon
exon-auto379526auto379526Theobroma cacaoexon
exon-auto379527auto379527Theobroma cacaoexon
exon-auto379528auto379528Theobroma cacaoexon
exon-auto379529auto379529Theobroma cacaoexon
exon-auto379530auto379530Theobroma cacaoexon
exon-auto379531auto379531Theobroma cacaoexon
exon-auto379532auto379532Theobroma cacaoexon
exon-auto379533auto379533Theobroma cacaoexon
exon-auto379534auto379534Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto379535auto379535Theobroma cacaoCDS
CDS-auto379536auto379536Theobroma cacaoCDS
CDS-auto379537auto379537Theobroma cacaoCDS
CDS-auto379538auto379538Theobroma cacaoCDS
CDS-auto379539auto379539Theobroma cacaoCDS
CDS-auto379540auto379540Theobroma cacaoCDS
CDS-auto379541auto379541Theobroma cacaoCDS
CDS-auto379542auto379542Theobroma cacaoCDS
CDS-auto379543auto379543Theobroma cacaoCDS
CDS-auto379544auto379544Theobroma cacaoCDS
CDS-auto379545auto379545Theobroma cacaoCDS
CDS-auto379546auto379546Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t013860.2 ID=Tc07v2_t013860.2|Name=Tc07v2_t013860.2|organism=Theobroma cacao|type=mRNA|length=1131bp
ATGGCATCATCTCTTCTCTCCAGAACTCTCTTGGGTCACCGCTTGGGTCA
ATTCTCATCCTCTCTCACACACAAACCCCTGATTTTCTCTTCTCTTTTCA
ATAAGAGACAGCTTCACGTACAGGCTGAGCCTACCTATACACCATATAAA
ACATCTGGTCGGCCTTCTCGTTTTATGGCCTCAGCAATTGACAGAAGAAT
TAATTTTTCTACGCAATCTCTATCCACAAATGATACGGTTGTTTCTGTTG
ATTGGCTCCATGCTAATCTAAGGGAGCCTGATATGAAGGTACTGGATGCA
TCCTGGTACATGCCAGATGAGCAGAGGAATCCTATTCAAGAGTATCAGGT
TGCTCACATTCCTGGTGCTCTTTTCTTTGATGTTGATGGAATAGCGGATC
GAACTACAAAGTTGCCACATATGCTGCCATCTGAGGAAGCCTTTGCTGCT
GCGGTGTCTGCTCTTGGCATCCAGAATAATGATGGACTGGTTGTTTATGA
TGGAAAGGGAATTTTTAGTGCAGCACGTGTCTGGTGGATGTTCCGAGTCT
TTGGGCATGACCGAGTATGGGTGTTAGATGGAGGCCTCCCAAGGTGGCGT
GCATCAGGATATGATGTTGAATCTAGTGCTTCTAGTGATGCTATTTTGAA
AGCCAGTGCTGCCAGTGAGGCTATAGAGAAAGTCTATCAGGGACAAACAG
CTGGACCGGTCACATTTCAGACAAAATTTCAGCCACATCTTGTCTGGACA
CTCGATCAGGTTAGAAGAAACATTGAGGAAAAAACTCACCAACATATAGA
TGCCCGCTCCAAGCCCCGATTTGATGGTGCTGCACCAGAACCTCGCAAGG
GAATAAGAAGTGGCCATGTCCCTGGCAGCAAATGTATTCCTTTTCCCCAT
ATGTTGGATGCTTCACAGACACTTTTACCCGCTGATGAACTTAAGAAACG
ATATCAGGAAGAAGGCATCTCATTGGAAGGCCCTGTTGTTACTTCTTGTG
GCACTGGTGTAACTGCTTGTGTTCTGGCATTGGGCCTCCATCGACTTGGG
AAGTCTGATGTTGCTGTGTATGATGGATCTTGGACCGAATGGGGTGCACA
ATCAGACACACCTGTTGACACTTCACTGTAA
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protein sequence of Tc07v2_p013860.2

>Tc07v2_p013860.2 ID=Tc07v2_p013860.2|Name=Tc07v2_p013860.2|organism=Theobroma cacao|type=polypeptide|length=377bp
MASSLLSRTLLGHRLGQFSSSLTHKPLIFSSLFNKRQLHVQAEPTYTPYK
TSGRPSRFMASAIDRRINFSTQSLSTNDTVVSVDWLHANLREPDMKVLDA
SWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAA
AVSALGIQNNDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR
ASGYDVESSASSDAILKASAASEAIEKVYQGQTAGPVTFQTKFQPHLVWT
LDQVRRNIEEKTHQHIDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFPH
MLDASQTLLPADELKKRYQEEGISLEGPVVTSCGTGVTACVLALGLHRLG
KSDVAVYDGSWTEWGAQSDTPVDTSL*
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