Tc07v2_t011230.1

Overview
NameTc07v2_t011230.1
Unique NameTc07v2_t011230.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length735
Properties
Property NameValue
NoteNucleolar essential-related-like protein
Model evidenceSupporting evidence includes similarity to: 17 Proteins
Productribosomal RNA small subunit methyltransferase nep-1-like
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662772
GenbankXM_018124338.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g011230Tc07v2_g011230Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p011230.1Tc07v2_p011230.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto374399auto374399Theobroma cacaoexon
exon-auto374400auto374400Theobroma cacaoexon
exon-auto374401auto374401Theobroma cacaoexon
exon-auto374402auto374402Theobroma cacaoexon
exon-auto374403auto374403Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto374404auto374404Theobroma cacaoCDS
CDS-auto374405auto374405Theobroma cacaoCDS
CDS-auto374406auto374406Theobroma cacaoCDS
CDS-auto374407auto374407Theobroma cacaoCDS
CDS-auto374408auto374408Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t011230.1 ID=Tc07v2_t011230.1|Name=Tc07v2_t011230.1|organism=Theobroma cacao|type=mRNA|length=735bp
ATGGGGAAAAGAGATATTGTGCATATATCGAAAGATGAATTAGAGAAAGT
ACGTGATATAGGATTCGTGAAATGGTTTAAAGAATGTGTTAATGATGTGC
CTTTAGAGCCACCTTTTTTGTTGGGTGCATCTACAGAGGAAGTAGATAAT
GTGACATCTACTGACAATTCTCAAGGATCCACATCCATTGATTCAGGTGC
AAGTGGAGATGGTACATCCTCAAGGTCAAGGCGGAAGCTTTTGAATTCTG
ATGAAGATGATAATTTCCTAAGGAAACAAGGGAAGAACCTTGGTGATTAT
CGGCCTGACATTGTTTTAGAGGTTCTCAAAGAACTCTTCGATAGTCCGCT
TAACGATAACAATAGGGTAAGAGCTATTTATGTGAAAACTGACGATGGAC
TTCTCTTTCAAGTCGAACCACACGTTCGTATTCCTAGAACACACGACCGC
TTTTATGGCATCATGCTGGAGCTGTTGGAAATAAAACGTGTACGAGTCCC
AGAGACAAATGAAGTGATTATTCAACAACTTGACGAGCCTTTGACACAGT
ATTTATCTTCCAACTCTCGTATAGTTGGATCATACACTTGCTATGGCTCG
GAAATGTATAATGTTTTTGCTGCTGAACAAGGCAAGCCGTGGTTTGTTGT
TGCAGTTTCTAATTATCCAATGAGTGCGGCATACAGTACAAAATTGGTCT
GCATAGCACTGGCAAACAAGTGGGAGCTCCACTAG
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protein sequence of Tc07v2_p011230.1

>Tc07v2_p011230.1 ID=Tc07v2_p011230.1|Name=Tc07v2_p011230.1|organism=Theobroma cacao|type=polypeptide|length=245bp
MGKRDIVHISKDELEKVRDIGFVKWFKECVNDVPLEPPFLLGASTEEVDN
VTSTDNSQGSTSIDSGASGDGTSSRSRRKLLNSDEDDNFLRKQGKNLGDY
RPDIVLEVLKELFDSPLNDNNRVRAIYVKTDDGLLFQVEPHVRIPRTHDR
FYGIMLELLEIKRVRVPETNEVIIQQLDEPLTQYLSSNSRIVGSYTCYGS
EMYNVFAAEQGKPWFVVAVSNYPMSAAYSTKLVCIALANKWELH*
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