Tc07v2_t009840.1

Overview
NameTc07v2_t009840.1
Unique NameTc07v2_t009840.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length3444
Properties
Property NameValue
NotePutative Probable LRR receptor-like serine/threonine-protein kinase At3g47570
Model evidenceSupporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productprobable LRR receptor-like serine/threonine-protein kinase At3g47570, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594289
GenbankXM_018124088.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g009840Tc07v2_g009840Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p009840.1Tc07v2_p009840.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto371127auto371127Theobroma cacaoexon
exon-auto371128auto371128Theobroma cacaoexon
exon-auto371129auto371129Theobroma cacaoexon
exon-auto371130auto371130Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto371131auto371131Theobroma cacaoCDS
CDS-auto371132auto371132Theobroma cacaoCDS
CDS-auto371133auto371133Theobroma cacaoCDS
CDS-auto371134auto371134Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t009840.1 ID=Tc07v2_t009840.1|Name=Tc07v2_t009840.1|organism=Theobroma cacao|type=mRNA|length=3444bp
ATGGAGAAACCTTGCCATCTATTTAGTATAGCTTTGGTCATTTCCATTCA
ATGTTATAATATAGTTTGTCTCTCTGATCAGCTGGCTCTTAATCGTGCCG
ATGAGGAAGCCCTTCTTGCCTTGAAAGCTCACATAATTCTGGATCCTGGA
AACATATTGGCCAAAAACTGGTCCAATTCTATTTCATTTTGTAATTGGTT
TGGTGTTTCCTGCGGTTCCCGGCACAAAAGAGTCACAGCCTTGACTCTTC
CTGGCATGAGTCTAAACGGCACCCTCCCTCCACAGCTAGGAAACCTTTCT
TTCCTCACAACCTTGGACCTCCGAGACAACAATTTCCATGGCAATCTGCC
CCCTGAGTTGGCTAAGTTGCGCCGTCTGAAATCTATGATTTTGTCAAAGA
ACTACTTCAGTGGAGAAATTCCAGAACAAATAGGCTATCTTCCTCGGCTG
CAGGACCTGTTTTTGTCAGGCAATGAACTTTCAGGTTCCATACCATTGAC
AATCTTCAACTCGTCTTCGTTGCAAAGGATTGTTTTGGCTACTAATAACC
TTGAAGGAAGTGTTCCAGATGATTTGTGTGACCATCTTCCAGTAATTCAG
ATGCTTGAGATTTCTTTCAACAACTTATCAGGAAAATTTTCGCCAAACCT
AGAAAGGTGTAGGCTGCTTCAGATCCTGGGGCTGTCAAACAATAGATTCA
CAGGAACCATACCTAGAGAATTTGGCAACTTGACTATGCTTAGGGAGTTA
TATCTTGGATTTAACAACTTGGAAGGTGAAATCCCAAGGGAGTTGAGTAG
GCTTGTTCGTTTGGAGAGGTTTGCAGTTGAGAACAGCGGCCTGACAGGAC
GAATTCCATCTGAAATGTTCAATATCTCTACCTTGAAAGACTTTGTGGTG
ATGAACAATAGCGTATCGGGCAGCCTCCCACATGACCTCTGTCACCGTCT
TCCTAATCTGGAAAAGGTTTTTTTCTATAACAACAAGCTCGATGGCAACT
TTCCAGCAGATATCGGTAATTGTACAATGCTTCAGCAACTTCGCCTAGGC
AGGAACAACTTTACAGGCGTAATACCGCAGGAGATAGGTAATCTCAAACA
TCTTGAGATATTGAGATTGTCAATCAACAGTCTAACAGGCCCGATTCCAC
CAGGAATCTTCAACATGTCAACACTGAAAGAAATTTCATTAGCTTACAAT
TATTTTTCAGGTAATCTTCCATCTGATATTGGCACAGGGCTTCCAAATGT
TGAAGAACTATTGGTTGGGGGCAATAAACTCGGTGGAAACATCCCTGATA
CTATCAGCAATGCTTCTAAACTAGCTTTTCTAGAATTGAGTGAGAACCTC
TTCACCGGTACCATACCCAAGTCCTTAGGTAATCTAGAATCTCTTTTGTT
GCTTGGCCTAGCAAATAATCATTTCATCAGTGATCCATCCACTCCAGAAT
TGAGTTTTATCACAACTTTGACAAAGTGCAGACAACTAAGGACTTTGGCA
ATAGCACAGAATCCCCTAGTTGGAGTATTCCCACCTTCTATTGCAAATTT
ATCAACTTCTCTTGAAAGTTTTGATGCCTCTGGCTGCAAAATCTTTGGTA
AAATACCTGGTGGGTTTCGCAATTTAAGCAGCTTGTTCTCATTAAGCCTA
AGCAACAATGAGTTGACCGGACCAATCTCTAATATATTCCAAAATTGGAC
AAACCTGCAAAGATTGTATCTTAGTGGCAATATGTTTGAGGGAACCATAC
CAGATGAACTATGTCACTTGAGGAACTTGGGAGAATTGTTTCTGCGTGAT
AATAGATTTTCTGGACCAATTCCAAGGTGCTTTGACAATCTTACCTCTCT
AAGAATTATCTTGTTAAACTCTAACAATTTGTCTTCAAATATACCTTCTA
CCCTTTTGAATCTTCAAGGCCTCTTGGTTTTGAACCTGTCATCAAATTCA
TTGAGTGGCTCTCTAGCTCCAGAAATTGGAAATTTGAAGGTCTTAACACA
AATAGATCTGTCCAAGAATACATTAGTTGGTCATATCCCACACAATTTCG
GTGATCTCAAAGACTTAACTAGTCTTTCTCTGGCACATAATAATTTGCAA
GGTTCCATTCCTGAATCCTTTGGCCACATGGTGAGTATGGAATTCTTAGA
TCTATCCAGCAATAATCTCTCTGGAGTCATTCCCAAGTCCTTGGAAAGGC
TTTCCTTTCTCAAATATTTAAACGTGTCTTTTAATACACTAGAAGGAGAA
ATCCCAAATGGAGGACCTTTTGGAAACTTCTCAGCTAGATCATTCATTAA
CAATCATGCACTTTGTGGGTCTCCTCGACTGCTAGTCCCACCTTGCAATT
CCAGCACCTTTCGAAGATCCAGGACAACCACTATGCATGTATTGAGATAT
GTTTTACCAACAATCTCTTTAATAATATTGATAACAGTCCTGTTTATTGT
CTTCAAAAGGTATCAGAATAAGAAAACAAATCCACCAGCAGTGACGGAAG
ATTCATTACCTTTGGCAACATGGAGAAGAGTATCGTACTATGAACTTTTA
CAAGCAACGAATGGATTCAGTGAATCCAATTTTATTGGATCAGGGAGTTT
TGGCACTGTCTATAGAGGGACACTTCAGGATGAGATGACTATTGCTATAA
AAATTTTCAATTTGCAGCTAGAGGGAGCATTTAGAAGCTTTGATGTTGAA
TGTGAAGTAATGCGCAATATTCGCCATCGCAATCTCGTGAAGATCATTAG
CAGTTGTTGTACGATTGACTTCAAAGCCTTGGTGCTTGAATTCATGCCTA
ATGGAAGCCTTGAGAAATGGTTGTATTCTCCGGAGTATTTTCTTGATATC
ATGCAGAGATTAAATATAATGATCGAAGTCGCATCAGCACTAGAATATCT
CCATTTTGGAAATTCAACACCTGTGATCCACTGTGACTTAAAGCCAAGCA
ATGTCTTACTTGATGAAGAAATGGTTGCTCATGTTTGTGATTTTGGCATG
GCCAAACTCTTGGGAGAAGGGAATTCCCTGACACAAACCATCACCCTTGC
CACTATGGGGTACATGGCACCAGAGTATGGATCAACCGGAATTGTTTCTA
CAAGAGGAGATGTTTATAATTATGGTATTCTGGTGATGGAAACATTTACG
GGGAGGAAGCCTACGAATGAAATGTTCGCTGGAGAAATGAACCTCAAAAG
TTGGGTGAAAGAGTCGTTGCCTCACGCGATAACCGAAGTAGCAGATGCCG
CTTTGTTGGGAGAAAAGAAGGAAAGTTTCATGGTTAAAACAAGTTGTATA
TCATCTGTTTTGCAGTTGGCTCTAGATTGTTGTGCAGAATCACCAAGAGA
AAGAAAAGACATGAAGGATGTTGTCGTGACGCTTACAAAGATCAAAGAGA
AGTTTCTAAAGGATATAGGACGAACTCAATCTTTGTATCTATGA
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protein sequence of Tc07v2_p009840.1

>Tc07v2_p009840.1 ID=Tc07v2_p009840.1|Name=Tc07v2_p009840.1|organism=Theobroma cacao|type=polypeptide|length=1148bp
MEKPCHLFSIALVISIQCYNIVCLSDQLALNRADEEALLALKAHIILDPG
NILAKNWSNSISFCNWFGVSCGSRHKRVTALTLPGMSLNGTLPPQLGNLS
FLTTLDLRDNNFHGNLPPELAKLRRLKSMILSKNYFSGEIPEQIGYLPRL
QDLFLSGNELSGSIPLTIFNSSSLQRIVLATNNLEGSVPDDLCDHLPVIQ
MLEISFNNLSGKFSPNLERCRLLQILGLSNNRFTGTIPREFGNLTMLREL
YLGFNNLEGEIPRELSRLVRLERFAVENSGLTGRIPSEMFNISTLKDFVV
MNNSVSGSLPHDLCHRLPNLEKVFFYNNKLDGNFPADIGNCTMLQQLRLG
RNNFTGVIPQEIGNLKHLEILRLSINSLTGPIPPGIFNMSTLKEISLAYN
YFSGNLPSDIGTGLPNVEELLVGGNKLGGNIPDTISNASKLAFLELSENL
FTGTIPKSLGNLESLLLLGLANNHFISDPSTPELSFITTLTKCRQLRTLA
IAQNPLVGVFPPSIANLSTSLESFDASGCKIFGKIPGGFRNLSSLFSLSL
SNNELTGPISNIFQNWTNLQRLYLSGNMFEGTIPDELCHLRNLGELFLRD
NRFSGPIPRCFDNLTSLRIILLNSNNLSSNIPSTLLNLQGLLVLNLSSNS
LSGSLAPEIGNLKVLTQIDLSKNTLVGHIPHNFGDLKDLTSLSLAHNNLQ
GSIPESFGHMVSMEFLDLSSNNLSGVIPKSLERLSFLKYLNVSFNTLEGE
IPNGGPFGNFSARSFINNHALCGSPRLLVPPCNSSTFRRSRTTTMHVLRY
VLPTISLIILITVLFIVFKRYQNKKTNPPAVTEDSLPLATWRRVSYYELL
QATNGFSESNFIGSGSFGTVYRGTLQDEMTIAIKIFNLQLEGAFRSFDVE
CEVMRNIRHRNLVKIISSCCTIDFKALVLEFMPNGSLEKWLYSPEYFLDI
MQRLNIMIEVASALEYLHFGNSTPVIHCDLKPSNVLLDEEMVAHVCDFGM
AKLLGEGNSLTQTITLATMGYMAPEYGSTGIVSTRGDVYNYGILVMETFT
GRKPTNEMFAGEMNLKSWVKESLPHAITEVADAALLGEKKESFMVKTSCI
SSVLQLALDCCAESPRERKDMKDVVVTLTKIKEKFLKDIGRTQSLYL*
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