Tc07v2_t008740.1

Overview
NameTc07v2_t008740.1
Unique NameTc07v2_t008740.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1563
Properties
Property NameValue
NotePutative Probable terpene synthase 9
Model evidenceSupporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
Productprobable terpene synthase 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662742
GenbankXM_018124268.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g008740Tc07v2_g008740Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p008740.1Tc07v2_p008740.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto369780auto369780Theobroma cacaoexon
exon-auto369781auto369781Theobroma cacaoexon
exon-auto369782auto369782Theobroma cacaoexon
exon-auto369783auto369783Theobroma cacaoexon
exon-auto369784auto369784Theobroma cacaoexon
exon-auto369785auto369785Theobroma cacaoexon
exon-auto369786auto369786Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto369787auto369787Theobroma cacaoCDS
CDS-auto369788auto369788Theobroma cacaoCDS
CDS-auto369789auto369789Theobroma cacaoCDS
CDS-auto369790auto369790Theobroma cacaoCDS
CDS-auto369791auto369791Theobroma cacaoCDS
CDS-auto369792auto369792Theobroma cacaoCDS
CDS-auto369793auto369793Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t008740.1 ID=Tc07v2_t008740.1|Name=Tc07v2_t008740.1|organism=Theobroma cacao|type=mRNA|length=1563bp
ATGCGGGAAACCAAAATCACCACCAAGTATGAGGATGAGCATGCAACCCG
GCTGGAAGTGTTGAAAGAAGATGCAAAAAGCTTGATTGCTGCCACTTCCA
TGGAAGATCCTCGAGACCTGTTGAAGCTCATTGACACCATTCAGCGGTTA
GGAGTTGCTTATCACTTTGAGAAGGAGATTAAGGAGGCTCTTCATCTTGT
TCATGCTTATATTCCCACTGATCTTTACCATACAGCTTTGCAATTTCGAC
TTCTACGTGAGAATGGTTTTTCCATCAGCTCAGACGTGTTCAACAAATTC
ATGGACAAAGATGGGAAATTCATGGACAATGTAAGAGAAGATGTGACGGG
GCTTTTGAGCTTGTTTGAGGCAGCACATCTTGGGATACCAGGAGAAGATG
TCTTAGAAGAAGCAAAGAGTTTTAGCAGAAATCATCTCAATTTGTTAACA
GGAAAGCTGGAGAGTAACATAGCTGAGCAAGTCCAACAGTCCCTGGACGT
TCCGCTGCATCGGAGAATGGCAAGGAGTGAAGCAAGGAACTTCATTGAAG
CCTACCAAAGGGATAAGGCAAAGAGCTCTGTCTTGCTCGAGCTTGCTAAG
TTGGATTACAATGTCTTGCAATCAATCTACCTAAAGGAGCTAAAGGAGCT
AGCAGAGTGGTGGGAGGATATGAACTTCAAGGAGAAGCTACCTTTCGGCC
GAGATCGATTGATAGAATGCTATATTTTGGCACTGGGATCAATCGCTAAC
CCCCAATTCTCCCAAGGCAGGAAGAATACTGCAAAATTGTGTGCCGTGGC
AACATATGTTGATGACGTATACGACAATTATGGATCAATTGATGAGCTTG
AAAAATTCACTGAAGCATTAGATCGATGGGATATTAAGACCATGGAGGAA
CTCCCAGAGTACATGAAAGTATGCTACTTAGCCCTGTATTACTCTGTCGA
TGAAGTAGTCCAGGATGCCTCTAAACATCTTGACCTGGAAGTTCTACCTT
ACGTTAAGGACAAATGGATAGCTTATTGTAGAGGAATGCTGAAAGAAGCA
CAATGGAATCAGAGTGGATACATGCCGACTTTTGATGAATATTTAAAAAA
TGCATGGATCTCTATTGGTGCTCCAGTACTCTTGACCATTTCTTATTTCG
GCATAAGCGAGTCCATAACTGAATATATCCCTCACTGCATTGAGAATTGG
TCTACCTCTGAGTTATTTTATCGTCCCAGCCTTGTTTTTAGGCTTGTAGA
TGATTTAATGACCTCCAAGGCCGAGATGGAAAAAGGAGAGATAGTGAATT
CAATTCGGTGTTACATGGTCCAACATGATGTGTCCGAGGAAGAAGCACAA
GATAACATCGAAGGCCTCATTAGCTACTCATGGAAGAAGCTTAACGAGAT
GGTTGTTCGCAATTCTTATCCTCTTCCAACGGTGAAACTAGCAATGGACA
CGGCACGATGCGTACAGCGAATATACAAGTATGGTGACTTCTTTGGTACT
CAAACCCAAGCCAATATAGATTGTGTGCGTAAATTACTGTTTGAGCCCAT
CCCCATGGATTGA
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protein sequence of Tc07v2_p008740.1

>Tc07v2_p008740.1 ID=Tc07v2_p008740.1|Name=Tc07v2_p008740.1|organism=Theobroma cacao|type=polypeptide|length=521bp
MRETKITTKYEDEHATRLEVLKEDAKSLIAATSMEDPRDLLKLIDTIQRL
GVAYHFEKEIKEALHLVHAYIPTDLYHTALQFRLLRENGFSISSDVFNKF
MDKDGKFMDNVREDVTGLLSLFEAAHLGIPGEDVLEEAKSFSRNHLNLLT
GKLESNIAEQVQQSLDVPLHRRMARSEARNFIEAYQRDKAKSSVLLELAK
LDYNVLQSIYLKELKELAEWWEDMNFKEKLPFGRDRLIECYILALGSIAN
PQFSQGRKNTAKLCAVATYVDDVYDNYGSIDELEKFTEALDRWDIKTMEE
LPEYMKVCYLALYYSVDEVVQDASKHLDLEVLPYVKDKWIAYCRGMLKEA
QWNQSGYMPTFDEYLKNAWISIGAPVLLTISYFGISESITEYIPHCIENW
STSELFYRPSLVFRLVDDLMTSKAEMEKGEIVNSIRCYMVQHDVSEEEAQ
DNIEGLISYSWKKLNEMVVRNSYPLPTVKLAMDTARCVQRIYKYGDFFGT
QTQANIDCVRKLLFEPIPMD*
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