Tc07v2_t006660.1

Overview
NameTc07v2_t006660.1
Unique NameTc07v2_t006660.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2892
Properties
Property NameValue
NotePutative disease resistance protein At4g10780
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productprobable disease resistance protein At5g63020, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593894
GenbankXM_018124984.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g006660Tc07v2_g006660Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p006660.1Tc07v2_p006660.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto366560auto366560Theobroma cacaoexon
exon-auto366561auto366561Theobroma cacaoexon
exon-auto366562auto366562Theobroma cacaoexon
exon-auto366563auto366563Theobroma cacaoexon
exon-auto366564auto366564Theobroma cacaoexon
exon-auto366565auto366565Theobroma cacaoexon
exon-auto366566auto366566Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto366567auto366567Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t006660.1 ID=Tc07v2_t006660.1|Name=Tc07v2_t006660.1|organism=Theobroma cacao|type=mRNA|length=2892bp
ATGGAGACTGCTGGGAATGTGGTTGTTAAATGCTGGGACAACCACAGAAG
CCTTGACCAGAAAACGATTGACCTAAAAAGAAAATTGGTTGATTTAAATG
CCCTGAAGCAAGACGTTGAATCAAGAAAGAAGGCAGAGCTGCATCCGAGG
AAGAAATTGAAGTCACAAGTTGATGTATGGTTGGGAAATGTTGAAAGAAT
AAATGATGAGATACAAAACCTCGAACAAAGAGTTGTGGAAAGCATTTCCA
TCTCACGTGGATTTTTCATGAAAGATGTTTTAAAAAAGATACAAGAAGTT
GAGGAGCTTCTTCAACAGGGTAAGTTTGATCAAGGTTTGGTAGTCAATGA
CCTTACGTGGATTGGACAAGCTTTGTCAACAACAAATTTAGTTGGGAAAG
CTGCAGAGAACTGTATGGAAGAAATTTGGACATGCTTGATGGATGATGAT
ATTAGAAGGATTGGTGTTTGGGGAATGGGAGGATTAGGTAAAACAACAAT
CATGAAGATCATCAACAACCGACTTTCAAAAATGACTGAAAAGTTCAATA
TTGTTATATGGATCACTGTATCAAAGGAGATGAACATCTCCAAAATTCAA
AATGGCATCTTACGTGCAATTGGAGAAGAGCTTCGCGAAGATGAGGATGA
AACAATAAGGGCAGGGAAGCTATTCGAATGGTTGAATGAAAAAGGCAGGT
ATGTGTTAATCTTAGATGATCTATGGGACAAGTTGTCCCTTGAAGAAGTA
GGAATCCCCAAGCCTTCTAACGGGAGTAAGTTAGTGGTAACGACTCGGAT
GTTGGATGTGTGTCGCTATTTGGGTTGTCGAGAAATTAGAATGCCTAATC
TTCCAAAACAAGATGCATGGAGTTTGTTTTTGGAGAAAGTAGGTAAAGAT
GTTCTCAATTATCCAGGTCTGTTACCAATTGTGGAATCTGTTGTTGAACA
ATGTGCTGGTTTGCCGCTAGCTATAGTTACAGTAGCTAGCAGTATGAAGG
GCATAACAAATGTTCATGAATGGAGGAATGCACGAAATGAATTAAGTAAA
CGTGTTAGAGGTGTGACTGGGTTAGATGAAAAGGTACTTCAACAACTCCA
ATTTAGCTATGACCATTTAGAATGTGAAAGAGTCCAGCAGTGCTTCCTCT
GTTGTGCATTATATCCCGAAGATTGTTATATCTATGAATATGATCTAATA
AACTTGTGGATTGCCGAGGGGCTTGTGGAAGAAATGGATAGCCAACAAGC
AGAGCTTGATCAAGGGTTTACCATATTGAATAAACTCAAAAATAATTGCT
TGTTAGAAAATGGTGAAAATGTCGGAGCTGTGAAGTTGCATGATCTTGTG
AGAGACATGGTGCTACGCATCACGAGACCACGATTCCTAGTAAGAGCCGG
CTTGCAATTGAAAGAGATACCACATGTACAAGAATGGACAGAAGATTTAG
AAAAGGTTTCATTGATGAGTAATTATGGCTTGCGAATTCCATCACAAATG
TCACCACCAAAATGCCAGATGCTCACAACTTTGTTGTTGTCCGATTGTCG
CATAAGGAGTATTCCAGATTGTTTCTTTGAGCAAATGAAGGGACTCAAAG
TTCTTGACCTTTCTCAGAATAATTTTAGAATTTTACCAAGTTCCATCTCT
AACTTGGAAGCTCTCACTCTGTTATCGGTAAGAGGATGTGATTATTTAAA
AAAGTTGCCATCTTTCTCAAAACTAGAAGCTTTAAAGAAATTAGATCTTT
TAGGCAGTAAAATCAAGAATCTCCCGCATGGGATGGACAGGTTGGTAAAT
CTCAATTATCTTCATCTGTGGGTGGAAGAAGTCCCTAGTGGAATATTATC
AAAATTCTCATGCCTGCGAGACTTGGGGCTAAGTTCTGCATTTGTCCGAG
GAGAAGAGATAGGTGAGTTAAAGAAGCTGGAGTTCTTTGAAGGGAGCTTT
TTTGACTTGAATGAATTGAATACTTTTGTGCAAGCTTTGAAGAGTCGAGG
ACAACAGCTTATTCGATACAACGTGGCTGTGGATATTAAAAATTTCTATA
GATTCTGCGAATCGGATAAATACATTGAATTATCTTGTTCCCATCCAATC
TGTAGAAATGGTGTCAAGTTTCCATCCGATCTTCAGAGATTGAGAATTAA
CTATGGCATTGTTGATTTCCCAGAAGAAGAGGTGTTTTTTCCATGGTTTA
TCCCAATGCAAAATGGCAAGTTTTCTTTTCTTAAAGAAATTGTTATATTT
AAATGTGAAAAAATAAAAAAGCTGTTCACGTGTAGTTGGGTGCAAAGTAA
CCTCCCAAATTTGGAAGAGTTAACTGTTCTGGAATGTCACCAAATGGAGG
AAATAATAGCATCAGAGATGGAATTCGTTGAAGAAGAAAGAATGGGTGGT
AGTAACAGTAATACCATCCCATTGACTCTTCCCAAACTAAGGATATTGGA
CTTGGACCTTTTACCGGAGCTGAAAAGTATTTGTGCGGCAAATAGAGTAA
TGGTGTGTGATTCTATTGAAGAGATTGGAATCTTTAATTGTTCAAAATTA
CAGAGGATTCCTCTGTATCTTCCACTGCTTGATGATGGCCAACCATCTCC
TCCTCCCTCTCTTAAGGCAATCTTTATATCTTCAAAGAAGCAGCTGAGAT
CGGTGGAGTGGGATCATCCCAATGCAAAGTCTGTACTGGGGCCAATTTTG
AAATCCGACGATTTTTTAGATCCTTGCAAATCAGATTCTGAATTTGATTA
CGGCTCAGATCCTGAATCAGATTACGACTCATTTCTTGAATCAGATACCG
ACTCAGATCCTGAATCACATTATGACTCACTTCCTGAATTAGATGCCAAC
TCAGATCTTGAATCAGATGCAAGTCTGCCTAATGATGGCTAA
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protein sequence of Tc07v2_p006660.1

>Tc07v2_p006660.1 ID=Tc07v2_p006660.1|Name=Tc07v2_p006660.1|organism=Theobroma cacao|type=polypeptide|length=964bp
METAGNVVVKCWDNHRSLDQKTIDLKRKLVDLNALKQDVESRKKAELHPR
KKLKSQVDVWLGNVERINDEIQNLEQRVVESISISRGFFMKDVLKKIQEV
EELLQQGKFDQGLVVNDLTWIGQALSTTNLVGKAAENCMEEIWTCLMDDD
IRRIGVWGMGGLGKTTIMKIINNRLSKMTEKFNIVIWITVSKEMNISKIQ
NGILRAIGEELREDEDETIRAGKLFEWLNEKGRYVLILDDLWDKLSLEEV
GIPKPSNGSKLVVTTRMLDVCRYLGCREIRMPNLPKQDAWSLFLEKVGKD
VLNYPGLLPIVESVVEQCAGLPLAIVTVASSMKGITNVHEWRNARNELSK
RVRGVTGLDEKVLQQLQFSYDHLECERVQQCFLCCALYPEDCYIYEYDLI
NLWIAEGLVEEMDSQQAELDQGFTILNKLKNNCLLENGENVGAVKLHDLV
RDMVLRITRPRFLVRAGLQLKEIPHVQEWTEDLEKVSLMSNYGLRIPSQM
SPPKCQMLTTLLLSDCRIRSIPDCFFEQMKGLKVLDLSQNNFRILPSSIS
NLEALTLLSVRGCDYLKKLPSFSKLEALKKLDLLGSKIKNLPHGMDRLVN
LNYLHLWVEEVPSGILSKFSCLRDLGLSSAFVRGEEIGELKKLEFFEGSF
FDLNELNTFVQALKSRGQQLIRYNVAVDIKNFYRFCESDKYIELSCSHPI
CRNGVKFPSDLQRLRINYGIVDFPEEEVFFPWFIPMQNGKFSFLKEIVIF
KCEKIKKLFTCSWVQSNLPNLEELTVLECHQMEEIIASEMEFVEEERMGG
SNSNTIPLTLPKLRILDLDLLPELKSICAANRVMVCDSIEEIGIFNCSKL
QRIPLYLPLLDDGQPSPPPSLKAIFISSKKQLRSVEWDHPNAKSVLGPIL
KSDDFLDPCKSDSEFDYGSDPESDYDSFLESDTDSDPESHYDSLPELDAN
SDLESDASLPNDG*
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